jonn-smith Goto Github PK

adv360-pro-zmk

Production repository for the all-new Advantage360 Professional using ZMK engine

avatarify

Avatars for Zoom and Skype

claragenomicsanalysis

SDK for GPU accelerated genome assembly and analysis

color_trace

Traces multiple color images using potrace. This is similar to Inkscape's Trace Bitmap function.

complete-striped-smith-waterman-library

dotfiles

My collection of dotfiles and settings to make CLI life easier.

fasthammer

A fast pairwise hamming distance calculator

flair

Full-Length Alternative Isoform analysis of RNA

lalboard

A 3D-printed keyboard inspired by the DataHand

mosaicaligner

Gil's HMM-based alignment/recombination software from Zilversmit et al. 2013.

ngraph.fromdot

Load dot files into ngraph.graph

owner

Get rid of the boilerplate code in properties based configuration.

pomegranate

Fast, flexible and easy to use probabilistic modelling in Python.

pysam

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

python_cli_template

A template repository for python programs that use a CLI.

seq-align

Fast, portable C implementations of Needleman-Wunsch and Smith-Waterman sequence alignment

talon

Technology agnostic long read analysis pipeline for transcriptomes

umi-tools

Tools for handling Unique Molecular Identifiers in NGS data sets

vivagraphjs

Graph drawing library for JavaScript

vvvvvv

The source code to VVVVVV!

wdl

Workflow Description Language - Specification and Implementations