johnegarza Goto Github PK
Name: John Garza
Type: User
John Garza's Projects
agfusion
Python package to annotate and visualize gene fusions.
analysis-workflows
MGI's CWL Cancer Pipelines.
bfx-workshop
chatgpt_planner_prototyping
chlamy-reference-genome
Attempts to improve the current Chlamydomonas reinhardtii reference genome
chromoseq
Chromoseq WGS analysis
cnvkit
Copy number variant detection from targeted DNA sequencing
consensus-script-draft
cpp
Repository containing the final lab for my class on object-oriented programming, taught in C++.
cromwell-cwl-issues
cromwell-file-preprocessor
cromwell-output-gatherer
docker-cle
Docker containerization for the CLE
docker-cromwell
docker-dna-alignment
A fat docker image for running alignment
docker-rnaseq
A fat docker image for running RnaSeq
docker-travis-cromwell
docker-vep-nonlocal
docker-vep_locale_helper-cwl
docker-vep_locales
eg-react
WashU Epigenome Browser
exome_test_helper
genome
Core modules used by the GMS
manta_testing
python3-scipy
pyutils-cwl
snvstory
Rapid and accurate ancestry inference using SNVs.
wgbs
WGBS snakemake pipeline
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