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jinhao94's Projects

dnds icon dnds

Calculate dN/dS ratio precisely (Ka/Ks) using a codon-by-codon counting method.

enrichedheatmap icon enrichedheatmap

make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.

galah icon galah

More scalable dereplication for metagenome assembled genomes

generate-databases icon generate-databases

Scripts to generate the databases for antiSMASH's ClusterBlast and KnownClusterBlast.

learning-about-snakemake icon learning-about-snakemake

Learning about snakemake, many many test... Hope everything goes well, fewer bugs and more happiness...

nextpolish icon nextpolish

Fast and accurately polish the genome generated by long reads.

pnps icon pnps

The method for calculating the PN/PS ratio

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