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3d-brain-segmentation

This is a repository containing code to Paper "Optimized High Resolution 3D Dense-U-Net Network for Brain and Spine Segmentation" published at MDPI Applied sciences journal - https://www.mdpi.com/2076-3417/9/3/404 .

a2gnn

algonauts2023_transformers

alpaca-lora

Instruct-tune LLaMA on consumer hardware

andysbrainbook

This repository contains the files that generate Andy's Brain Book on ReadTheDocs.

awesome-brain-encoding--decoding

brain-diffuser

Official repository for the paper "Brain-Diffuser: Natural scene reconstruction from fMRI signals using generative latent diffusion" by Furkan Ozcelik and Rufin VanRullen.

brain-score

A framework for evaluating models on their alignment to brain and behavioral measurements (50+ benchmarks)

braph-2-matlab

cabinet

This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model for the purposes of circumventing JLF within Nibabies.

cbig

chatgpt

Lightweight package for interacting with ChatGPT's API by OpenAI. Uses reverse engineered official API.

clip

CLIP (Contrastive Language-Image Pretraining), Predict the most relevant text snippet given an image

clip2brain

Code from paper "Natural language supervision with a large and diverse dataset builds better models of human high-level visual cortex"

collaborative_brain_decomposition

contrastiveseg

ICCV2021 (Oral) - Exploring Cross-Image Pixel Contrast for Semantic Segmentation

cuda-api-wrappers

Thin, unified, C++-flavored wrappers for the CUDA APIs

cuda-code

darts

Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation

deeplearningexamples

State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.

deepnsd

Code for the deep neural network modeling of a large-scale fMRI dataset.

dinov2

PyTorch code and models for the DINOv2 self-supervised learning method.

encoding-and-decoding-of-visual-stimulus-from-human-brain-activity-an-fmri-study

flagscale

FlagScale is a large model toolkit based on open-sourced projects.

flash-attention

Fast and memory-efficient exact attention

floc-version-1

Functional Localizer

fmri_meg_xlm

PyTorch original implementation of Cross-lingual Language Model Pretraining.

fmriprep

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

fsl6.0.0

FSL 6.0.0 Sources (without data)

gcn

Implementation of Graph Convolutional Networks in TensorFlow