jganchong Goto Github PK
Name: Johnny Gan Chong
Type: User
Bio: Ph.D. student at the University of California, Berkeley interested in ImageJ, imaging, coding, and developmental biology.
Location: Berkeley
Johnny Gan Chong's Projects
1d_oscillation_macro
Gets the oscillation of bright object in 1 dimension (left to right). Eg. a flame
create_random_contour_pattern
ImageJ: Creates random contour pattern with user settings
create_random_rois
Macro to generate random ROIs with user specified width, height and min distance between ROIs.
imagej-codes
Compilation of ImageJ macros to do a wide variety of functions.
imagej_2channel_3d_foci_colocalizer
Uses a distance radius to colocalize foci in 2 channels in the 3D space
imagej_gel_alignment_macro
Aligns DNA/Protein Gels using user set reference points
imagej_leaf_segmentation
Segment and measure width and length of individual leafs/algaes in a mat
imagej_live_stack_intensity_plotted
Plot mean intensity profile of a stack according to a region defined by cursor in real time
imagej_manual_2d_image_alignment
Macro for ImageJ that allows user to manually align two 2D Images
imagej_move_multiple_rois
Allows User to move multiple ROIs at once without altering ROI Manager
imagej_radialprofile
Measure average intensity along ellipse border at different ellipse sizes
imagej_reddit_maxima_based_alignment
Align two 2D images based on maxima values
imagej_stack-hyperstack_kymogram
This macro creates a static and/or dynamic kymogram of an object of interest from a stack or hyperstack.
paint_volume_calculator
ImageJ Batch Macro: Segment and calculate the volumes of paints in 3D from Channels 1 and 2. Output result table and projected image with ROI to verify segmentation.
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