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Name: Jose Flores-Canales
Type: User
Name: Jose Flores-Canales
Type: User
Accelerated sampling framework with autoencoder-based method
Parmed based python program for preparing TI parm7
AlphaFold Meets Flow Matching for Generating Protein Ensembles
A curated list of community detection research papers with implementations.
Bioinformatics data analysis and visualization toolkit
Official git repository for Biopython (originally converted from CVS)
Python-centric Cookiecutter for Molecular Computational Chemistry Packages
Python implementation of conformational space annealing
data from D3R Grand Challenge 4 2018
Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code
Forked from https://gitlab.com/compstorylab/discrete-shocklet-transform
A probabilistic programming language in TensorFlow. Deep generative models, variational inference.
Geometric GNN Dojo provides unified implementations and experiments to explore the design space of Geometric Graph Neural Networks.
The Python version of the least dependent component analysis and mutual information methods proposed by A. Kraskov, H. Stögbauer, and P. Grassberger, Phys. Rev. E 69 (6) 066138, 2004.
LOOS: a lightweight object-oriented structure analysis library
Contact map alignment
Scripts for removing water molecules of membrane-proteins in AMBER PDB format. Various MD data analysis scripts.
A modern, open library for the analysis of molecular dynamics trajectories
Python scripts used for DREAM11: Module disease identification
PINY cleanup and new feature integration.
Development version of plumed 2
Code for the ProteinMPNN paper
Quick implementation of xmeans in python and C
scripts to analyze NAMD trajectories generated by RAMD
This software reads pdb files (or downloads them from the web) and assigns secondary structure.
Calculates distance fluctuations of atoms from long MD trajectories
Simple python script to visualise secondary structures as a single SVG image.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.