Comments (4)
Please ensure you are on the starfish branch: https://github.com/JEFworks/MERmaid/tree/starfish
The master branch has addition features such as visualizing segmentation boundaries and immunofluorescence stains that have not been updated in STARFISH.
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Thank you for your quick response! I tried using that branch of MERmaid, but the same issue is still there.
When I run with "python -m http.server 8080," the warning saying "code 404, message File not found" is now gone thankfully, but the window on my browser is simply black and doesn't load anything.
When I run with "npm start," the same TypeError that I showed before is there. On the Terminal, I see the following warnings:
./src/index.js
Line 123: Missing radix parameter radix
Line 124: Missing radix parameter radix
Line 125: Missing radix parameter radix
Line 134: Expected to return a value in arrow function array-callback-return
Line 136: Expected to return a value in arrow function array-callback-return
Line 162: 'options' is assigned a value but never used no-unused-vars
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The column headers in your data.csv.gz file currently must be
x,y,gene1,gene2
Previously versions automatically detected the column header names, but that made it difficult to distinguish between different feature types (features that needed factor-based colors, versus features that needed continuous colors, versus features that represented cell boundaries, etc). Ideally there would be a config file to deal with this. Feel free to open a feature request if you think that would be useful.
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That fixed it for me. Thank you!
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Related Issues (9)
- Run without re-building doesn't load HOT 2
- HTTP 404 error when using own data
- The uploaded bg.png lost the original ratio in the viewer
- TODO HOT 3
- Running list of related work HOT 1
- Enable convex hulls around points by factor
- Bitmap or raster image background HOT 1
- Download and citation for all data? HOT 1
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