Jeff Paril's Projects
Alignment or mapping of nucleotide sequencing reads
Trying to detect signatures of selection in allergen 5 of Lolium perenne and Lolium rigidum
Search for UTRs of BTR-like genes
A comparative genomics workflow using Nextflow, conda, Julia and R
Code, and data repository accompanying the manuscript titled: "Slow and steady wins the race: spatial and stochastic processes and the failure of suppression gene drives"
Genomic prediction and association analysis (GPAS) of quantitative traits using pool sequencing data, including population landscapes, individual-based and pool-based GPAS cross-validation simulations.
Config files for my GitHub profile.
Creative commons attributed vector graphics and other digital art works
Lolium rigidum genome assembly and annotation
An independent Rust text editor that runs in your terminal!
Pseudo-orthonormal elastic-net-like regularisation
Segmentation of 3D plant models
Quantitative and population genetics analyses of populations, pools, half-sib/full-sib families, and polyploids
An OS named after *Puccinia maydis* (common rust fungus species infecting maize and sorghum)
Seed phenotying and germination assessment using photographs.
Simple plots using base R
Simulate genotype and phenotype data for quantitative genetics analyses
Terminal based presentation tool
Trial-estimated breeding values: best linear unbiased predictors and estimators (BLUPs & BLUEs) of entries in single and multi-environment breeding trials under completely randomised, randomised complete/incomplete block, and spatial designs (CRD, RBD & spatial)
R package for plotting and comparing means with violin plots
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent