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accelerated_advanced_python_weeks3_4

This repository contains jupyter notebooks for weeks 3 and 4 of Accelerated Computational Biology class. This tutorial will cover advanced NumPy lectures including several algorithms used for data analysis in computational biology

accelerated_intro_to_compbio_part_2

Part 2 of the "Accelerated intro to Computational Biology for Biologists" course for the Master's Programme in Computational Biology, Universidad Politecnica de Madrid. This covers the first 2 weeks (~24 hours) of material, taught by Mark Wilkinson.

accelerated_intro_wilkinsonexams

Exam Questions and instructions for the Accellerated Introduction to Computational Biology M.Sc. course - Wilkinson Section

advent-of-code-2022

This is me starting the Advent of Code 2022 two months late (not meant to be serious, just doing it occasionally for fun)

bioinfo_programmingchallenges

A BioRuby-based course for the Computational Biology M.Sc. Programme

cheatsheets

RStudio Cheat Sheets

data-cleaning-rmotr-freecodecamp

freecodecamp-intro-to-numpy

freecodecamp-intro-to-pandas

freecodecamp-pandas-real-life-example

gdl_code

The official code repository for examples in the O'Reilly book 'Generative Deep Learning'

handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

introduction_r

javier.lopez.rodriguez_introbioinformatics

An Introduction to Computational Biology - UPM Master's Course

javierlopezrodriguez.github.io

learning-pytorch

Experimenting and learning with pytorch, pytorch geometric, pytorch lightning...

machine-learning-upm

Assignments for the Machine Learning subject (UPM's Computational Biology Master)

mongodb-fastapi

RESTful API using FastAPI to connect to a MongoDB database

network-analysis-synbio

Network Analysis exercise from the Synthetic and Systems Biology course of UPM's Master in Computational Biology

optimization

Practising with Bayesian Optimization

pytorch_geometric_cs224w_2023

Solving some of the google colabs from Stanford's course CS224W Machine Learning With Graphs.

rdp-reading-data-with-python-and-pandas

retos_assignments_jlr

Solutions to the assignments of the subject Bioinformatics Programming Challenges from UPM's Master in Computational Biology

viraldiseasesanddrugs

Repository for the Viral Diseases and Drugs ontology, created by Javier López and Lucía Sánchez for the Semantic Technologies subject at UPM's Computational Biology Master