Comments (6)
Hi,
conda is very slow - I just tested it on my mac here and the installation took 20 minutes! So maybe wait a little longer?
Just to be safe, maybe test whether there is an issue with your conda installation, by creating a test env with fewer packages. Run the following command: conda env create -n test_env python=3.8 numpy
. This will create a new environment called test_env
and install python and numpy into it). This took less than a minute.
from das.
If it's not your conda installation, you could use mamba, which is a drop-in replacement for conda, but is much much faster.
- Install mamba via
conda install mamba -n base -c conda-forge
. - Install DAS using mamba
mamba env create ncb/das-env -n das
.
Install finished in less than 3 minutes.
from das.
Thanks!
conda is very slow - I just tested it on my mac here and the installation took 20 minutes! So maybe wait a little longer?
Now, I am trying to run conda env create ncb/das-nogui-env -n das
on Ubuntu sever, and I will report if I can do or not later. I confirmed that I could made the sample conda env by running conda create -n test python=3.9
in advance.
from das.
I've done! das_installation.log
was the log file. This process in my Ubuntu server with docker container took 30 min.
Thanks!
# cat das_installation.log
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Downloading and Extracting Packages
yarl-1.6.3 | 136 KB | ########## | 100%
qt-5.12.9 | 99.5 MB | ########## | 100%
traitlets-5.1.1 | 84 KB | ########## | 100%
_tflow_select-2.3.0 | 2 KB | ########## | 100%
gnutls-3.6.15 | 1.0 MB | ########## | 100%
opt_einsum-3.3.0 | 57 KB | ########## | 100%
astunparse-1.6.3 | 17 KB | ########## | 100%
gst-plugins-base-1.1 | 2.6 MB | ########## | 100%
packaging-21.3 | 36 KB | ########## | 100%
tensorboard-data-ser | 2.7 MB | ########## | 100%
llvmlite-0.36.0 | 393 KB | ########## | 100%
typing_inspect-0.7.1 | 15 KB | ########## | 100%
python-flatbuffers-1 | 24 KB | ########## | 100%
ffmpeg-4.2.2 | 59.6 MB | ########## | 100%
lame-3.100 | 323 KB | ########## | 100%
perl-5.26.2 | 10.5 MB | ########## | 100%
libunistring-0.9.10 | 536 KB | ########## | 100%
pyqt5-sip-4.19.18 | 310 KB | ########## | 100%
pysoundfile-0.10.3.p | 23 KB | ########## | 100%
cycler-0.11.0 | 12 KB | ########## | 100%
matplotlib-scalebar- | 19 KB | ########## | 100%
scikit-learn-1.0.1 | 5.6 MB | ########## | 100%
frozenlist-1.2.0 | 79 KB | ########## | 100%
absl-py-0.13.0 | 178 KB | ########## | 100%
flammkuchen-0.9.2 | 18 KB | ########## | 100%
aiohttp-3.8.1 | 516 KB | ########## | 100%
wheel-0.35.1 | 38 KB | ########## | 100%
nspr-4.30 | 233 KB | ########## | 100%
tbb-2020.3 | 1.1 MB | ########## | 100%
libflac-1.3.3 | 486 KB | ########## | 100%
flatbuffers-2.0.0 | 975 KB | ########## | 100%
libvpx-1.7.0 | 1.2 MB | ########## | 100%
defopt-6.1.0 | 17 KB | ########## | 100%
libevent-2.1.10 | 1.1 MB | ########## | 100%
nettle-3.7.3 | 809 KB | ########## | 100%
google-auth-1.33.0 | 80 KB | ########## | 100%
matplotlib-base-3.5. | 5.7 MB | ########## | 100%
gettext-0.21.0 | 2.6 MB | ########## | 100%
glib-2.68.2 | 3.0 MB | ########## | 100%
aiosignal-1.2.0 | 12 KB | ########## | 100%
python_abi-3.9 | 4 KB | ########## | 100%
libxkbcommon-1.0.3 | 581 KB | ########## | 100%
mysql-common-8.0.25 | 1.5 MB | ########## | 100%
asciitree-0.3.3 | 10 KB | ########## | 100%
abseil-cpp-20210324. | 965 KB | ########## | 100%
tensorflow-base-2.6. | 76.7 MB | ########## | 100%
param-1.12.0 | 75 KB | ########## | 100%
keras-preprocessing- | 35 KB | ########## | 100%
tensorflow-estimator | 267 KB | ########## | 100%
pooch-1.4.0 | 41 KB | ########## | 100%
libnghttp2-1.46.0 | 680 KB | ########## | 100%
protobuf-3.14.0 | 306 KB | ########## | 100%
librosa-0.8.1 | 147 KB | ########## | 100%
libxml2-2.9.12 | 772 KB | ########## | 100%
pyqt-5.12.3 | 21 KB | ########## | 100%
libsndfile-1.0.31 | 602 KB | ########## | 100%
async-timeout-4.0.1 | 10 KB | ########## | 100%
libiconv-1.16 | 1.4 MB | ########## | 100%
google-pasta-0.2.0 | 46 KB | ########## | 100%
requests-oauthlib-1. | 23 KB | ########## | 100%
libopus-1.3.1 | 491 KB | ########## | 100%
gstreamer-1.18.4 | 2.0 MB | ########## | 100%
libllvm10-10.0.1 | 22.1 MB | ########## | 100%
tensorboard-plugin-w | 630 KB | ########## | 100%
xarray-0.19.0 | 557 KB | ########## | 100%
libglib-2.68.2 | 3.1 MB | ########## | 100%
gast-0.4.0 | 13 KB | ########## | 100%
zarr-2.8.1 | 106 KB | ########## | 100%
nss-3.67 | 2.1 MB | ########## | 100%
libvorbis-1.3.7 | 398 KB | ########## | 100%
tensorboard-2.6.0 | 4.9 MB | ########## | 100%
pcre2-10.35 | 487 KB | ########## | 100%
audioread-2.1.9 | 33 KB | ########## | 100%
numcodecs-0.8.0 | 658 KB | ########## | 100%
numba-0.53.1 | 3.3 MB | ########## | 100%
icu-68.1 | 11.8 MB | ########## | 100%
pycparser-2.21 | 94 KB | ########## | 100%
x264-1!157.20191217 | 922 KB | ########## | 100%
wrapt-1.13.3 | 52 KB | ########## | 100%
cachetools-4.2.2 | 13 KB | ########## | 100%
multidict-5.1.0 | 69 KB | ########## | 100%
libclang-11.1.0 | 19.2 MB | ########## | 100%
rsa-4.7.2 | 28 KB | ########## | 100%
sphinxcontrib-napole | 19 KB | ########## | 100%
keras-tuner-1.0.3 | 58 KB | ########## | 100%
libogg-1.3.5 | 199 KB | ########## | 100%
libidn2-2.3.2 | 81 KB | ########## | 100%
pockets-0.9.1 | 24 KB | ########## | 100%
freetype-2.11.0 | 618 KB | ########## | 100%
termcolor-1.1.0 | 9 KB | ########## | 100%
terminaltables-3.1.0 | 13 KB | ########## | 100%
openh264-2.1.0 | 722 KB | ########## | 100%
numpy-base-1.21.2 | 4.9 MB | ########## | 100%
resampy-0.2.2 | 332 KB | ########## | 100%
pyasn1-0.4.8 | 54 KB | ########## | 100%
pyqtwebengine-5.12.1 | 174 KB | ########## | 100%
h5py-3.6.0 | 1.1 MB | ########## | 100%
matplotlib-3.5.0 | 28 KB | ########## | 100%
blinker-1.4 | 23 KB | ########## | 100%
fasteners-0.16.3 | 24 KB | ########## | 100%
google-auth-oauthlib | 20 KB | ########## | 100%
pyasn1-modules-0.2.8 | 72 KB | ########## | 100%
alsa-lib-1.2.3 | 560 KB | ########## | 100%
git-2.32.0 | 5.9 MB | ########## | 100%
markdown-3.3.4 | 129 KB | ########## | 100%
colorcet-2.0.6 | 1.4 MB | ########## | 100%
docutils-0.18.1 | 663 KB | ########## | 100%
grpcio-1.42.0 | 2.1 MB | ########## | 100%
typing-extensions-3. | 12 KB | ########## | 100%
pyct-0.4.6 | 24 KB | ########## | 100%
astor-0.8.1 | 47 KB | ########## | 100%
libtasn1-4.16.0 | 58 KB | ########## | 100%
libprotobuf-3.14.0 | 2.0 MB | ########## | 100%
pyqt-impl-5.12.3 | 5.9 MB | ########## | 100%
pyqtchart-5.12 | 253 KB | ########## | 100%
numpy-1.21.2 | 23 KB | ########## | 100%
ncurses-6.3 | 782 KB | ########## | 100%
idna-3.3 | 49 KB | ########## | 100%
peakutils-1.3.3 | 10 KB | ########## | 100%
tabulate-0.8.9 | 40 KB | ########## | 100%
libpq-13.3 | 2.7 MB | ########## | 100%
tensorflow-2.6.0 | 4 KB | ########## | 100%
oauthlib-3.1.1 | 90 KB | ########## | 100%
mysql-libs-8.0.25 | 1.8 MB | ########## | 100%
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working...
Installed package of scikit-learn can be accelerated using scikit-learn-intelex.
More details are available here: https://intel.github.io/scikit-learn-intelex
For example:
$ conda install scikit-learn-intelex
$ python -m sklearnex my_application.py
done
Installing pip dependencies: ...working... Ran pip subprocess with arguments:
['/workspace/anaconda3/envs/das/bin/python', '-m', 'pip', 'install', '-U', '-r', '/workspace/condaenv.9qb1bzyo.requirements.txt']
Pip subprocess output:
Collecting das
Downloading das-0.22.8-py3-none-any.whl (85 kB)
Collecting pysoundfile
Downloading PySoundFile-0.9.0.post1-py2.py3-none-any.whl (24 kB)
Requirement already satisfied: zarr in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.8.1)
Requirement already satisfied: defopt in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (6.1.0)
Requirement already satisfied: matplotlib_scalebar in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.8.0)
Requirement already satisfied: pyyaml in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (6.0)
Requirement already satisfied: librosa in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.8.1)
Requirement already satisfied: pandas in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.3.4)
Requirement already satisfied: colorcet in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.0.6)
Requirement already satisfied: keras-tuner in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.0.3)
Requirement already satisfied: scikit-learn in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.0.1)
Requirement already satisfied: peakutils in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.3.3)
Requirement already satisfied: numpy in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.21.2)
Requirement already satisfied: h5py in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.6.0)
Requirement already satisfied: scipy in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.7.1)
Requirement already satisfied: matplotlib in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.5.0)
Requirement already satisfied: flammkuchen in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.9.2)
Requirement already satisfied: cffi>=0.6 in ./anaconda3/envs/das/lib/python3.9/site-packages (from pysoundfile->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 2)) (1.14.6)
Requirement already satisfied: pycparser in ./anaconda3/envs/das/lib/python3.9/site-packages (from cffi>=0.6->pysoundfile->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 2)) (2.21)
Requirement already satisfied: param>=1.7.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from colorcet->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.12.0)
Requirement already satisfied: pyct>=0.4.4 in ./anaconda3/envs/das/lib/python3.9/site-packages (from colorcet->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.4.6)
Requirement already satisfied: docutils>=0.10 in ./anaconda3/envs/das/lib/python3.9/site-packages (from defopt->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.18.1)
Requirement already satisfied: sphinxcontrib-napoleon>=0.7.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from defopt->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.7)
Requirement already satisfied: pockets>=0.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from sphinxcontrib-napoleon>=0.7.0->defopt->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.9.1)
Requirement already satisfied: six>=1.5.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from sphinxcontrib-napoleon>=0.7.0->defopt->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.16.0)
Requirement already satisfied: tables in ./anaconda3/envs/das/lib/python3.9/site-packages (from flammkuchen->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.6.1)
Collecting kt-legacy
Downloading kt_legacy-1.0.4-py3-none-any.whl (9.6 kB)
Requirement already satisfied: ipython in ./anaconda3/envs/das/lib/python3.9/site-packages (from keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (7.29.0)
Requirement already satisfied: requests in ./anaconda3/envs/das/lib/python3.9/site-packages (from keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.26.0)
Requirement already satisfied: packaging in ./anaconda3/envs/das/lib/python3.9/site-packages (from keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (21.3)
Requirement already satisfied: tensorboard in ./anaconda3/envs/das/lib/python3.9/site-packages (from keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.6.0)
Requirement already satisfied: backcall in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.2.0)
Requirement already satisfied: setuptools>=18.5 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (58.0.4)
Requirement already satisfied: pexpect>4.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (4.8.0)
Requirement already satisfied: traitlets>=4.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (5.1.1)
Requirement already satisfied: pickleshare in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.7.5)
Requirement already satisfied: pygments in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.10.0)
Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.0.20)
Requirement already satisfied: decorator in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (5.1.0)
Requirement already satisfied: jedi>=0.16 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.18.0)
Requirement already satisfied: matplotlib-inline in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.1.2)
Requirement already satisfied: parso<0.9.0,>=0.8.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from jedi>=0.16->ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.8.2)
Requirement already satisfied: ptyprocess>=0.5 in ./anaconda3/envs/das/lib/python3.9/site-packages (from pexpect>4.3->ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.7.0)
Requirement already satisfied: wcwidth in ./anaconda3/envs/das/lib/python3.9/site-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.2.5)
Requirement already satisfied: pooch>=1.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.4.0)
Requirement already satisfied: numba>=0.43.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.53.1)
Requirement already satisfied: audioread>=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.1.9)
Requirement already satisfied: resampy>=0.2.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.2.2)
Requirement already satisfied: soundfile>=0.10.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.10.3.post1)
Requirement already satisfied: joblib>=0.14 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.1.0)
Requirement already satisfied: llvmlite<0.37,>=0.36.0rc1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from numba>=0.43.0->librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.36.0)
Requirement already satisfied: pyparsing!=3.0.5,>=2.0.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from packaging->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.0.4)
Requirement already satisfied: appdirs in ./anaconda3/envs/das/lib/python3.9/site-packages (from pooch>=1.0->librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.4.4)
Requirement already satisfied: threadpoolctl>=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from scikit-learn->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.2.0)
Requirement already satisfied: cycler>=0.10 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.11.0)
Requirement already satisfied: fonttools>=4.22.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (4.25.0)
Requirement already satisfied: pillow>=6.2.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (8.4.0)
Requirement already satisfied: python-dateutil>=2.7 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.8.2)
Requirement already satisfied: kiwisolver>=1.0.1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.3.1)
Requirement already satisfied: pytz>=2017.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from pandas->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2021.3)
Requirement already satisfied: idna<4,>=2.5 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.3)
Requirement already satisfied: charset-normalizer~=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.0.4)
Requirement already satisfied: urllib3<1.27,>=1.21.1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.26.7)
Requirement already satisfied: certifi>=2017.4.17 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2021.10.8)
Requirement already satisfied: numexpr>=2.6.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tables->flammkuchen->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.7.3)
Requirement already satisfied: grpcio>=1.24.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.42.0)
Requirement already satisfied: google-auth-oauthlib<0.5,>=0.4.1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.4.1)
Requirement already satisfied: absl-py>=0.4 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.13.0)
Requirement already satisfied: google-auth<2,>=1.6.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.33.0)
Requirement already satisfied: protobuf>=3.6.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.14.0)
Requirement already satisfied: tensorboard-data-server<0.7.0,>=0.6.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.6.0)
Requirement already satisfied: tensorboard-plugin-wit>=1.6.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.6.0)
Requirement already satisfied: markdown>=2.6.8 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.3.4)
Requirement already satisfied: werkzeug>=0.11.15 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.0.2)
Requirement already satisfied: wheel>=0.26 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.35.1)
Requirement already satisfied: pyasn1-modules>=0.2.1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from google-auth<2,>=1.6.3->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.2.8)
Requirement already satisfied: rsa<5,>=3.1.4 in ./anaconda3/envs/das/lib/python3.9/site-packages (from google-auth<2,>=1.6.3->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (4.7.2)
Requirement already satisfied: cachetools<5.0,>=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from google-auth<2,>=1.6.3->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (4.2.2)
Requirement already satisfied: requests-oauthlib>=0.7.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from google-auth-oauthlib<0.5,>=0.4.1->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.3.0)
Requirement already satisfied: pyasn1<0.5.0,>=0.4.6 in ./anaconda3/envs/das/lib/python3.9/site-packages (from pyasn1-modules>=0.2.1->google-auth<2,>=1.6.3->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.4.8)
Requirement already satisfied: oauthlib>=3.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests-oauthlib>=0.7.0->google-auth-oauthlib<0.5,>=0.4.1->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.1.1)
Requirement already satisfied: fasteners in ./anaconda3/envs/das/lib/python3.9/site-packages (from zarr->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.16.3)
Requirement already satisfied: numcodecs>=0.6.4 in ./anaconda3/envs/das/lib/python3.9/site-packages (from zarr->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.8.0)
Requirement already satisfied: asciitree in ./anaconda3/envs/das/lib/python3.9/site-packages (from zarr->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.3.3)
Installing collected packages: kt-legacy, pysoundfile, das
Successfully installed das-0.22.8 kt-legacy-1.0.4 pysoundfile-0.9.0.post1
done
#
# To activate this environment, use
#
# $ conda activate das
#
# To deactivate an active environment, use
#
# $ conda deactivate
from das.
Great! We are looking into speeding up the installation process.
from das.
For future reference: We now have DAS conda packages instead of environments (see here). This greatly speeds up installations.
from das.
Related Issues (20)
- No vocalization predictions during model finetuning HOT 2
- new fixes to DAS x previous code
- multple predictions for the same vocalization HOT 2
- DAS installation not running without GPU HOT 2
- Locating annotations in a large data folder HOT 1
- Failure during testing phase of training HOT 3
- Left clicks in GUI doesn't create annotations HOT 2
- fix y axis in waveform GUI problem HOT 2
- Can't install das due to tensorflow version conflicts HOT 9
- Can't install das in Mac Pro M2 HOT 2
- Installation on arm Macs (M1 Macbook Air) HOT 4
- Play waveform through speaker doesn't work on Mac HOT 2
- zarr temp store files filling up local drive HOT 6
- training and predicting events with multi-channel data HOT 1
- qt.qpa.plugin: Could not find the Qt platform plugin "wayland" in "/home/ejhc/.local/lib/python3.10/site-packages/cv2/qt/plugins" HOT 2
- playback USVs between 20khz-115khz through the speaker
- Model doesn't get saved during training HOT 2
- Error in installation HOT 19
- Prediction error HOT 7
- Playback segmentation fault. HOT 5
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