Comments (6)
postpop
commented on August 25, 2024
Hi,
conda is very slow - I just tested it on my mac here and the installation took 20 minutes! So maybe wait a little longer?
Just to be safe, maybe test whether there is an issue with your conda installation, by creating a test env with fewer packages. Run the following command: conda env create -n test_env python=3.8 numpy. This will create a new environment called test_env and install python and numpy into it). This took less than a minute.
from das.
postpop
commented on August 25, 2024
If it's not your conda installation, you could use mamba, which is a drop-in replacement for conda, but is much much faster.
- Install mamba via
conda install mamba -n base -c conda-forge. - Install DAS using mamba
mamba env create ncb/das-env -n das.
Install finished in less than 3 minutes.
from das.
hkoda
commented on August 25, 2024
Thanks!
conda is very slow - I just tested it on my mac here and the installation took 20 minutes! So maybe wait a little longer?
Now, I am trying to run conda env create ncb/das-nogui-env -n das on Ubuntu sever, and I will report if I can do or not later. I confirmed that I could made the sample conda env by running conda create -n test python=3.9 in advance.
from das.
hkoda
commented on August 25, 2024
I've done! das_installation.log was the log file. This process in my Ubuntu server with docker container took 30 min.
Thanks!
# cat das_installation.log
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Downloading and Extracting Packages
yarl-1.6.3 | 136 KB | ########## | 100%
qt-5.12.9 | 99.5 MB | ########## | 100%
traitlets-5.1.1 | 84 KB | ########## | 100%
_tflow_select-2.3.0 | 2 KB | ########## | 100%
gnutls-3.6.15 | 1.0 MB | ########## | 100%
opt_einsum-3.3.0 | 57 KB | ########## | 100%
astunparse-1.6.3 | 17 KB | ########## | 100%
gst-plugins-base-1.1 | 2.6 MB | ########## | 100%
packaging-21.3 | 36 KB | ########## | 100%
tensorboard-data-ser | 2.7 MB | ########## | 100%
llvmlite-0.36.0 | 393 KB | ########## | 100%
typing_inspect-0.7.1 | 15 KB | ########## | 100%
python-flatbuffers-1 | 24 KB | ########## | 100%
ffmpeg-4.2.2 | 59.6 MB | ########## | 100%
lame-3.100 | 323 KB | ########## | 100%
perl-5.26.2 | 10.5 MB | ########## | 100%
libunistring-0.9.10 | 536 KB | ########## | 100%
pyqt5-sip-4.19.18 | 310 KB | ########## | 100%
pysoundfile-0.10.3.p | 23 KB | ########## | 100%
cycler-0.11.0 | 12 KB | ########## | 100%
matplotlib-scalebar- | 19 KB | ########## | 100%
scikit-learn-1.0.1 | 5.6 MB | ########## | 100%
frozenlist-1.2.0 | 79 KB | ########## | 100%
absl-py-0.13.0 | 178 KB | ########## | 100%
flammkuchen-0.9.2 | 18 KB | ########## | 100%
aiohttp-3.8.1 | 516 KB | ########## | 100%
wheel-0.35.1 | 38 KB | ########## | 100%
nspr-4.30 | 233 KB | ########## | 100%
tbb-2020.3 | 1.1 MB | ########## | 100%
libflac-1.3.3 | 486 KB | ########## | 100%
flatbuffers-2.0.0 | 975 KB | ########## | 100%
libvpx-1.7.0 | 1.2 MB | ########## | 100%
defopt-6.1.0 | 17 KB | ########## | 100%
libevent-2.1.10 | 1.1 MB | ########## | 100%
nettle-3.7.3 | 809 KB | ########## | 100%
google-auth-1.33.0 | 80 KB | ########## | 100%
matplotlib-base-3.5. | 5.7 MB | ########## | 100%
gettext-0.21.0 | 2.6 MB | ########## | 100%
glib-2.68.2 | 3.0 MB | ########## | 100%
aiosignal-1.2.0 | 12 KB | ########## | 100%
python_abi-3.9 | 4 KB | ########## | 100%
libxkbcommon-1.0.3 | 581 KB | ########## | 100%
mysql-common-8.0.25 | 1.5 MB | ########## | 100%
asciitree-0.3.3 | 10 KB | ########## | 100%
abseil-cpp-20210324. | 965 KB | ########## | 100%
tensorflow-base-2.6. | 76.7 MB | ########## | 100%
param-1.12.0 | 75 KB | ########## | 100%
keras-preprocessing- | 35 KB | ########## | 100%
tensorflow-estimator | 267 KB | ########## | 100%
pooch-1.4.0 | 41 KB | ########## | 100%
libnghttp2-1.46.0 | 680 KB | ########## | 100%
protobuf-3.14.0 | 306 KB | ########## | 100%
librosa-0.8.1 | 147 KB | ########## | 100%
libxml2-2.9.12 | 772 KB | ########## | 100%
pyqt-5.12.3 | 21 KB | ########## | 100%
libsndfile-1.0.31 | 602 KB | ########## | 100%
async-timeout-4.0.1 | 10 KB | ########## | 100%
libiconv-1.16 | 1.4 MB | ########## | 100%
google-pasta-0.2.0 | 46 KB | ########## | 100%
requests-oauthlib-1. | 23 KB | ########## | 100%
libopus-1.3.1 | 491 KB | ########## | 100%
gstreamer-1.18.4 | 2.0 MB | ########## | 100%
libllvm10-10.0.1 | 22.1 MB | ########## | 100%
tensorboard-plugin-w | 630 KB | ########## | 100%
xarray-0.19.0 | 557 KB | ########## | 100%
libglib-2.68.2 | 3.1 MB | ########## | 100%
gast-0.4.0 | 13 KB | ########## | 100%
zarr-2.8.1 | 106 KB | ########## | 100%
nss-3.67 | 2.1 MB | ########## | 100%
libvorbis-1.3.7 | 398 KB | ########## | 100%
tensorboard-2.6.0 | 4.9 MB | ########## | 100%
pcre2-10.35 | 487 KB | ########## | 100%
audioread-2.1.9 | 33 KB | ########## | 100%
numcodecs-0.8.0 | 658 KB | ########## | 100%
numba-0.53.1 | 3.3 MB | ########## | 100%
icu-68.1 | 11.8 MB | ########## | 100%
pycparser-2.21 | 94 KB | ########## | 100%
x264-1!157.20191217 | 922 KB | ########## | 100%
wrapt-1.13.3 | 52 KB | ########## | 100%
cachetools-4.2.2 | 13 KB | ########## | 100%
multidict-5.1.0 | 69 KB | ########## | 100%
libclang-11.1.0 | 19.2 MB | ########## | 100%
rsa-4.7.2 | 28 KB | ########## | 100%
sphinxcontrib-napole | 19 KB | ########## | 100%
keras-tuner-1.0.3 | 58 KB | ########## | 100%
libogg-1.3.5 | 199 KB | ########## | 100%
libidn2-2.3.2 | 81 KB | ########## | 100%
pockets-0.9.1 | 24 KB | ########## | 100%
freetype-2.11.0 | 618 KB | ########## | 100%
termcolor-1.1.0 | 9 KB | ########## | 100%
terminaltables-3.1.0 | 13 KB | ########## | 100%
openh264-2.1.0 | 722 KB | ########## | 100%
numpy-base-1.21.2 | 4.9 MB | ########## | 100%
resampy-0.2.2 | 332 KB | ########## | 100%
pyasn1-0.4.8 | 54 KB | ########## | 100%
pyqtwebengine-5.12.1 | 174 KB | ########## | 100%
h5py-3.6.0 | 1.1 MB | ########## | 100%
matplotlib-3.5.0 | 28 KB | ########## | 100%
blinker-1.4 | 23 KB | ########## | 100%
fasteners-0.16.3 | 24 KB | ########## | 100%
google-auth-oauthlib | 20 KB | ########## | 100%
pyasn1-modules-0.2.8 | 72 KB | ########## | 100%
alsa-lib-1.2.3 | 560 KB | ########## | 100%
git-2.32.0 | 5.9 MB | ########## | 100%
markdown-3.3.4 | 129 KB | ########## | 100%
colorcet-2.0.6 | 1.4 MB | ########## | 100%
docutils-0.18.1 | 663 KB | ########## | 100%
grpcio-1.42.0 | 2.1 MB | ########## | 100%
typing-extensions-3. | 12 KB | ########## | 100%
pyct-0.4.6 | 24 KB | ########## | 100%
astor-0.8.1 | 47 KB | ########## | 100%
libtasn1-4.16.0 | 58 KB | ########## | 100%
libprotobuf-3.14.0 | 2.0 MB | ########## | 100%
pyqt-impl-5.12.3 | 5.9 MB | ########## | 100%
pyqtchart-5.12 | 253 KB | ########## | 100%
numpy-1.21.2 | 23 KB | ########## | 100%
ncurses-6.3 | 782 KB | ########## | 100%
idna-3.3 | 49 KB | ########## | 100%
peakutils-1.3.3 | 10 KB | ########## | 100%
tabulate-0.8.9 | 40 KB | ########## | 100%
libpq-13.3 | 2.7 MB | ########## | 100%
tensorflow-2.6.0 | 4 KB | ########## | 100%
oauthlib-3.1.1 | 90 KB | ########## | 100%
mysql-libs-8.0.25 | 1.8 MB | ########## | 100%
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working...
Installed package of scikit-learn can be accelerated using scikit-learn-intelex.
More details are available here: https://intel.github.io/scikit-learn-intelex
For example:
$ conda install scikit-learn-intelex
$ python -m sklearnex my_application.py
done
Installing pip dependencies: ...working... Ran pip subprocess with arguments:
['/workspace/anaconda3/envs/das/bin/python', '-m', 'pip', 'install', '-U', '-r', '/workspace/condaenv.9qb1bzyo.requirements.txt']
Pip subprocess output:
Collecting das
Downloading das-0.22.8-py3-none-any.whl (85 kB)
Collecting pysoundfile
Downloading PySoundFile-0.9.0.post1-py2.py3-none-any.whl (24 kB)
Requirement already satisfied: zarr in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.8.1)
Requirement already satisfied: defopt in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (6.1.0)
Requirement already satisfied: matplotlib_scalebar in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.8.0)
Requirement already satisfied: pyyaml in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (6.0)
Requirement already satisfied: librosa in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.8.1)
Requirement already satisfied: pandas in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.3.4)
Requirement already satisfied: colorcet in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.0.6)
Requirement already satisfied: keras-tuner in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.0.3)
Requirement already satisfied: scikit-learn in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.0.1)
Requirement already satisfied: peakutils in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.3.3)
Requirement already satisfied: numpy in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.21.2)
Requirement already satisfied: h5py in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.6.0)
Requirement already satisfied: scipy in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.7.1)
Requirement already satisfied: matplotlib in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.5.0)
Requirement already satisfied: flammkuchen in ./anaconda3/envs/das/lib/python3.9/site-packages (from das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.9.2)
Requirement already satisfied: cffi>=0.6 in ./anaconda3/envs/das/lib/python3.9/site-packages (from pysoundfile->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 2)) (1.14.6)
Requirement already satisfied: pycparser in ./anaconda3/envs/das/lib/python3.9/site-packages (from cffi>=0.6->pysoundfile->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 2)) (2.21)
Requirement already satisfied: param>=1.7.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from colorcet->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.12.0)
Requirement already satisfied: pyct>=0.4.4 in ./anaconda3/envs/das/lib/python3.9/site-packages (from colorcet->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.4.6)
Requirement already satisfied: docutils>=0.10 in ./anaconda3/envs/das/lib/python3.9/site-packages (from defopt->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.18.1)
Requirement already satisfied: sphinxcontrib-napoleon>=0.7.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from defopt->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.7)
Requirement already satisfied: pockets>=0.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from sphinxcontrib-napoleon>=0.7.0->defopt->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.9.1)
Requirement already satisfied: six>=1.5.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from sphinxcontrib-napoleon>=0.7.0->defopt->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.16.0)
Requirement already satisfied: tables in ./anaconda3/envs/das/lib/python3.9/site-packages (from flammkuchen->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.6.1)
Collecting kt-legacy
Downloading kt_legacy-1.0.4-py3-none-any.whl (9.6 kB)
Requirement already satisfied: ipython in ./anaconda3/envs/das/lib/python3.9/site-packages (from keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (7.29.0)
Requirement already satisfied: requests in ./anaconda3/envs/das/lib/python3.9/site-packages (from keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.26.0)
Requirement already satisfied: packaging in ./anaconda3/envs/das/lib/python3.9/site-packages (from keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (21.3)
Requirement already satisfied: tensorboard in ./anaconda3/envs/das/lib/python3.9/site-packages (from keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.6.0)
Requirement already satisfied: backcall in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.2.0)
Requirement already satisfied: setuptools>=18.5 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (58.0.4)
Requirement already satisfied: pexpect>4.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (4.8.0)
Requirement already satisfied: traitlets>=4.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (5.1.1)
Requirement already satisfied: pickleshare in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.7.5)
Requirement already satisfied: pygments in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.10.0)
Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.0.20)
Requirement already satisfied: decorator in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (5.1.0)
Requirement already satisfied: jedi>=0.16 in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.18.0)
Requirement already satisfied: matplotlib-inline in ./anaconda3/envs/das/lib/python3.9/site-packages (from ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.1.2)
Requirement already satisfied: parso<0.9.0,>=0.8.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from jedi>=0.16->ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.8.2)
Requirement already satisfied: ptyprocess>=0.5 in ./anaconda3/envs/das/lib/python3.9/site-packages (from pexpect>4.3->ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.7.0)
Requirement already satisfied: wcwidth in ./anaconda3/envs/das/lib/python3.9/site-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->ipython->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.2.5)
Requirement already satisfied: pooch>=1.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.4.0)
Requirement already satisfied: numba>=0.43.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.53.1)
Requirement already satisfied: audioread>=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.1.9)
Requirement already satisfied: resampy>=0.2.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.2.2)
Requirement already satisfied: soundfile>=0.10.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.10.3.post1)
Requirement already satisfied: joblib>=0.14 in ./anaconda3/envs/das/lib/python3.9/site-packages (from librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.1.0)
Requirement already satisfied: llvmlite<0.37,>=0.36.0rc1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from numba>=0.43.0->librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.36.0)
Requirement already satisfied: pyparsing!=3.0.5,>=2.0.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from packaging->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.0.4)
Requirement already satisfied: appdirs in ./anaconda3/envs/das/lib/python3.9/site-packages (from pooch>=1.0->librosa->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.4.4)
Requirement already satisfied: threadpoolctl>=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from scikit-learn->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.2.0)
Requirement already satisfied: cycler>=0.10 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.11.0)
Requirement already satisfied: fonttools>=4.22.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (4.25.0)
Requirement already satisfied: pillow>=6.2.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (8.4.0)
Requirement already satisfied: python-dateutil>=2.7 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.8.2)
Requirement already satisfied: kiwisolver>=1.0.1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from matplotlib->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.3.1)
Requirement already satisfied: pytz>=2017.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from pandas->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2021.3)
Requirement already satisfied: idna<4,>=2.5 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.3)
Requirement already satisfied: charset-normalizer~=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.0.4)
Requirement already satisfied: urllib3<1.27,>=1.21.1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.26.7)
Requirement already satisfied: certifi>=2017.4.17 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2021.10.8)
Requirement already satisfied: numexpr>=2.6.2 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tables->flammkuchen->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.7.3)
Requirement already satisfied: grpcio>=1.24.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.42.0)
Requirement already satisfied: google-auth-oauthlib<0.5,>=0.4.1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.4.1)
Requirement already satisfied: absl-py>=0.4 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.13.0)
Requirement already satisfied: google-auth<2,>=1.6.3 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.33.0)
Requirement already satisfied: protobuf>=3.6.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.14.0)
Requirement already satisfied: tensorboard-data-server<0.7.0,>=0.6.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.6.0)
Requirement already satisfied: tensorboard-plugin-wit>=1.6.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.6.0)
Requirement already satisfied: markdown>=2.6.8 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.3.4)
Requirement already satisfied: werkzeug>=0.11.15 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (2.0.2)
Requirement already satisfied: wheel>=0.26 in ./anaconda3/envs/das/lib/python3.9/site-packages (from tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.35.1)
Requirement already satisfied: pyasn1-modules>=0.2.1 in ./anaconda3/envs/das/lib/python3.9/site-packages (from google-auth<2,>=1.6.3->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.2.8)
Requirement already satisfied: rsa<5,>=3.1.4 in ./anaconda3/envs/das/lib/python3.9/site-packages (from google-auth<2,>=1.6.3->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (4.7.2)
Requirement already satisfied: cachetools<5.0,>=2.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from google-auth<2,>=1.6.3->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (4.2.2)
Requirement already satisfied: requests-oauthlib>=0.7.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from google-auth-oauthlib<0.5,>=0.4.1->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (1.3.0)
Requirement already satisfied: pyasn1<0.5.0,>=0.4.6 in ./anaconda3/envs/das/lib/python3.9/site-packages (from pyasn1-modules>=0.2.1->google-auth<2,>=1.6.3->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.4.8)
Requirement already satisfied: oauthlib>=3.0.0 in ./anaconda3/envs/das/lib/python3.9/site-packages (from requests-oauthlib>=0.7.0->google-auth-oauthlib<0.5,>=0.4.1->tensorboard->keras-tuner->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (3.1.1)
Requirement already satisfied: fasteners in ./anaconda3/envs/das/lib/python3.9/site-packages (from zarr->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.16.3)
Requirement already satisfied: numcodecs>=0.6.4 in ./anaconda3/envs/das/lib/python3.9/site-packages (from zarr->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.8.0)
Requirement already satisfied: asciitree in ./anaconda3/envs/das/lib/python3.9/site-packages (from zarr->das->-r /workspace/condaenv.9qb1bzyo.requirements.txt (line 1)) (0.3.3)
Installing collected packages: kt-legacy, pysoundfile, das
Successfully installed das-0.22.8 kt-legacy-1.0.4 pysoundfile-0.9.0.post1
done
#
# To activate this environment, use
#
# $ conda activate das
#
# To deactivate an active environment, use
#
# $ conda deactivate
from das.
postpop
commented on August 25, 2024
Great! We are looking into speeding up the installation process.
from das.
postpop
commented on August 25, 2024
For future reference: We now have DAS conda packages instead of environments (see here). This greatly speeds up installations.
from das.
Related Issues (20)
- No vocalization predictions during model finetuning HOT 2
- new fixes to DAS x previous code
- multple predictions for the same vocalization HOT 2
- DAS installation not running without GPU HOT 2
- Locating annotations in a large data folder HOT 1
- Failure during testing phase of training HOT 3
- Left clicks in GUI doesn't create annotations HOT 2
- fix y axis in waveform GUI problem HOT 2
- Can't install das due to tensorflow version conflicts HOT 9
- Can't install das in Mac Pro M2 HOT 2
- Installation on arm Macs (M1 Macbook Air) HOT 4
- Play waveform through speaker doesn't work on Mac HOT 2
- zarr temp store files filling up local drive HOT 6
- training and predicting events with multi-channel data HOT 1
- qt.qpa.plugin: Could not find the Qt platform plugin "wayland" in "/home/ejhc/.local/lib/python3.10/site-packages/cv2/qt/plugins" HOT 2
- playback USVs between 20khz-115khz through the speaker
- Model doesn't get saved during training HOT 2
- Error in installation HOT 19
- Prediction error HOT 7
- Playback segmentation fault. HOT 5
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