jamorrison Goto Github PK

bioconda-recipes

Conda recipes for the bioconda channel.

biscuit

BISulfite-seq CUI Toolkit

biscuiteer

a small package of bsseq tools for Biscuit output

biscuiteerdata

bisplotti

Plotting package for bisulfite sequencing and methylation arrays

compartmap

Reconstruction of higher order chromatin from scRNA-seq and scATAC-seq

impractical_python_projects

Code & supporting files for chapters in book

jamorrison.github.io

miser

convenience package for loading IDATs off of GEO (short for "sesamizer")

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

multiqc_testdata

Test data for MultiQC. See https://github.com/ewels/MultiQC

rcr_spring_2106_git

rust-htslib

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

salmon

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

sesame

R package for analyzing Infinium DNA methylation BeadChip data

soccer_analysis

Analyzing Data from 100+ Years of Soccer Matches

spasm

CLI for finding ASM in epiBED files

stormseq_protocols

This repository contains the current STORM-seq protocol for library construction and analysis

synthbar

Add synthetic cell barcode to FASTQ reads

temp_simulation

Simulate the temperature of a room with attached heating system

testing_in_c

Exploring software testing options for C

wgms_kit_comparison

Code Repository for WGMS Kit Comparison Paper