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analyzer

Analyses data from cell profiler output. This repo serves as a showcase for the Golem shiny app structure

cherryquant

Quantifies mCherry florescence in a RGB image by counting pixels

crispr

Engine for finding guide RNA's globally

deeplearning_pytorch_tuts

Dont mind me, just playing around and learning how neural networks work

demo-blog-vue

A demo project to learn Vue.js

django_react

Boilerplate code for a production django react project

first-order-model

This repository contains the source code for the paper First Order Motion Model for Image Animation

genomics

Pipeline for calling SNV/SV's and gene fusions from paired end illumina reads

golemshowcase

An example Shiny app built using the Golem Framework. This forms part of a series of blog posts related to shiny development with Golem.

modified-lenet-1

Classification of CIFAR 10 dataset implementation in pytorch. This will form the basis of the next classifier I try out

nucleus

Computer vision project using Facebook's detectron2 interface for mask RCNN and detection of cells and their nuclei

protein_turnover

R script used to calculate protein turnover for the manuscript: PPE38-dependent substrates of M. tuberculosis alter NF-kB signalling and inflammatory responses in macrophages

provision

Shiny app for proteomics data analysis

pytorch-neat

resources

Resources probably has what you need. If something is missing, feel free to add it!

scraperbot

Download images from goolge automatically using python.

soapdenovo2

Next generation sequencing reads de novo assembler.