isa-tools Goto Github PK
Name: ISA tools
Type: Organization
Location: International Collaboration (leads based at: University of Oxford, UK)
Blog: http://isa-tools.org
Name: ISA tools
Type: Organization
Location: International Collaboration (leads based at: University of Oxford, UK)
Blog: http://isa-tools.org
Documentation for various xml2isa converters
Motif finding algorithm and tool to find functionally relevant motifs in workflows.
New BII web-application.
Parses ISA-Tab investigation file and dependent files into one big hash-based Perl data structure
Conda recipes for the bioconda channel.
BioFormat code developed at WebValley
The web application, model, database persistence, services package and web services for the BII. Led by Eamonn Maguire (Uni. of Oxford) & Philippe Rocca-Serra (Uni. of Oxford).
Python parser for ISAtab, a biological file format for experimental metadata
A selection of tools to automatically update content in BioSharing.
Testing for the BioSharing widget
a repo for a docker container for a microservice converting an MWTab to ISA-Tab format
a docker container for R package reshape2 to perform cast/melt operation on data matrices
Collaborative Open Plant Omics
Reproducibility study on a metabolomics dataset
Training material produced for the Data Carpentry workshops
Documentation
A simple Django app to wrap datacite calls.
Repository with exercises related to ISA
OWL Importer to Neo4j for FAIRsharing
Frictionless JSON Data Packages for Life Science
Data intensive science for everyone.
A Galaxy datatype for the ISA format
graph2tab, a library to convert experimental workflow graphs into tabular formats
The web browser in this package has pretty basic functionalities, but is also quite flexible, and for in-app browsing, like that done in IntelliJ for instance, in order to navigate to help pages, it is perfect. I don't need any special JNI calls to invoke browsers therefore I don't introduce platform-dependent code into the codebase.
ISA tools API
ISAconfiguration files which have been created by the ISAconfigurator. These can be used by ISAcreator, ISAvalidator, ISAconverter and the BII Data Management Tool
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