Comments (7)
It will be important to communicate to the researchers which page do not work any longer.
from iblenv.
Example of unclear QC check:
- Video Right QC: FAIL https://alyx.internationalbrainlab.org/ibl_reports/gallery/e9f7a204-a236-4441-88fc-b34b1a8a82e3/qc - but no test seem to FAIL according to the display. The session page indicated that the frame rate is wrong;
_videoRight_framerate": ["FAIL"
- The same issue happens for this session for the DLC "WARNING" whilst no test fails according to the display. The labels WARNING, FAIL are correct according to the session page
- Same issue for training session: https://alyx.internationalbrainlab.org/ibl_reports/gallery/65951f21-98da-403e-ba30-e77fbe2774ac/qc
- Fix the display for video / DLC so the bars are not all 1
- Add a link from the QC or Overview page to get to the session page
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On this page: https://alyx.internationalbrainlab.org/ibl_reports/gallery/sessions
- Have a filter for training / ephys sessions (and other modalities)
- Mark the recording modality / protocol used
- Add plot from camera (e.g. a-b-c from ephys recording, or whole plot if simpler)
- Note: training sessions have no plots, but they could have the raw video plot + psychometric curves eventually
from iblenv.
No taskQC (whilst using standard protocol) / session QC and no Alyx Tasks for fiberphotometry sessions, example:
- https://alyx.internationalbrainlab.org/ibl_reports/gallery/8fdff393-f14f-4b70-a168-8851a1158e69, using standard
_iblrig_tasks_biasedChoiceWorld8.12.9
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Have information of which rig it is on session plot page (+filter based on the rig)
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Can we add a search feature to the session plot page on Alyx to search by animal #, date, and probe?
from iblenv.
Review is done, new sprint item to fix some of the issues.
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Related Issues (20)
- `churchland_learninglifespan` alignment errors HOT 3
- Non public loading documentation (e.g photometry, mesoscope)
- Test support issue
- on-call: LFP Neurostars
- Warn external users that passive data is released HOT 1
- AWS certificates expire August 2024 HOT 2
- [Bug report] - Reshape error on ephys data load HOT 1
- [Bug report] - Missing Alyx data on Flatiron HOT 2
- [Bug report] - cannot load wheel_dlc_viewer HOT 2
- Change log page and emails for external users HOT 3
- Patch trials < v5 HOT 1
- Nate question on how to retrieve first timestamps HOT 1
- Flake documentation for ibllib.qc package HOT 2
- Add iblutil to iblenv docs
- Screen position from wheel dynamics example HOT 1
- Allen Neuropixel Course
- Remove need to copy certs
- Write post-mortem of spike sorting re-run HOT 1
- Photometry loading documentation
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