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pkrusche avatar pkrusche commented on May 29, 2024

Hi,

One possible solution is to use a precompiled htslib that doesn’t depend on liblzma (or has it configured correctly) using cmake -DHTSLIB_INSTALL_PATH=<path to htslib>

For compiling htslib, you can point it to the right liblzma using its configure script or disable liblzma.

Which system are you working on (Linux distribution, version)?

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RSherman15 avatar RSherman15 commented on May 29, 2024

Thanks, setting -DHTSLIB_INSTALL_PATH did the trick. I'm now having other issues compiling, but I'll open a new issue as I believe they are unrelated.

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