Giter Club home page Giter Club logo

Comments (2)

jrobinso avatar jrobinso commented on August 16, 2024

Jonathan, could you attach a small test bam that reproduces the
problem? You can also email it to me directly, or let me know where I
can fetch it.

bamReader readHeader needs some refactoring to handle larger BAM
header content.

It was not sufficient to simply increase the number of bytes initially
read, as only a single bgz block was uncompressed during processing
despite a larger range fetched by the dataLoader.

Our BAM files for Proton have one @rg https://github.com/RG entry
per processed tile (96) and many @co https://github.com/CO comments
to capture parameters used to generate the files, making for rather
large BAM headers.


Reply to this email directly or view it on GitHub
#7.

from igv.js.

jrobinso avatar jrobinso commented on August 16, 2024

Jonathan, I think this is fixed. Could you test on one of your files, and close if it works?

from igv.js.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.