(major) john (major)'s Projects
Deploy your HPC Cluster on AWS in 20min. with just 1-Click.
Ansi HTML Adapter
Comprehensive alignment, whole-genome coverage, and capture coverage statistics.
Convert text with ansi color codes to HTML
OS X menubar status indicator
Arioc: GPU-accelerated DNA short-read alignment
Print a list of paths as a tree of paths 🌳
Atom package that identifes all your git projects and provide quick project opening.
Atom package to sync files bidirectionally between remote host and local over ssh+rsync
AWS ParallelCluster is an AWS supported Open Source cluster management tool to deploy and manage HPC clusters in the AWS cloud.
Mapped QC analysis program
Pure Bash implementation of the hashid algorithm from http://hashids.org/
A simple curses library made in bash to draw terminal interfaces
The BioGraph genomics analysis platform
bioGUI provides install modules for bioinformatic software for users and allows developers to script a GUI for their applications.
Bioinformatics analysis scripts, workflows, general code examples
The uncompromising Python code formatter
breader (Buffered File Reader), asynchronous parsing and pre-processing while reading file. Safe cancellation is also supported.
btw east bay getaway
The next version of bwa-mem
Colorized cat command in Python. Uses Pygments to do automatic syntax highlighting.
Chaos Engineering Toolkit & Orchestration for Developers
cherrypy recipes : google oauth2
Easy terminal colors, with chainable methods.
Make Complex Heatmaps
An application to graphically summarise kmer enrichment in a set of sequences
Files and methodology pertaining to the sequencing and analysis of SARS-CoV-2, causative agent of COVID-19.
A simple, distributed task scheduler and runner with a web based UI.
Cronicle V2 (Orchestra) community prototype