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Hugh O'Brien's Projects

activeadmin icon activeadmin

The administration framework for Ruby on Rails applications.

controlled-peptide-generation icon controlled-peptide-generation

source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molecular Dynamics"

dockq icon dockq

DockQ is a single continuous quality measure for protein docked models based on the CAPRI evaluation protocol

minima icon minima

Minima is a one-size-fits-all Jekyll theme for writers.

pyalm icon pyalm

Python Wrapper for the PLOS Article Level Metrics App API

pyslice icon pyslice

An (experimental) Python 3D Model slicing algorithm.

rack-param_to_cookie icon rack-param_to_cookie

Store selected request parameters to cookies for use in future requests. Useful for affiliate, referral or promotion links.

shap icon shap

A game theoretic approach to explain the output of any machine learning model.

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