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ascaris

ASCARIS: Annotation & Structure-Based Representation of SAVs

awesome-denovo-papers

Awesome De novo drugs design papers

crossbar-data-process

CROssBAR v2 GraphDB Data Process

crossbar-pypath

Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotations and intercellular communication roles.

crossbarv1

Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations

crossbarv2

This is a repo for migration of CROssBAR data to the Neo4j database via BioCypher

deepresponse

DeepResponse: Large Scale Prediction of Cancer Cell Line Drug Response with Deep Learning Based Pharmacogenomic Modelling

deepscreen2

domain2go

drugapp

druggen

Official implementation of DrugGEN

druidom

DRUIDom (DRUg Interacting Domains): a computational method for predicting new drug/compound - target protein interactions for drug discovery and repurposing, via mapping ligands to structural domains

holiloc

HoliLoc: Image, Sequence, and Interactome Based Prediction of Protein Subcellular Localization

hpo2go

Mapping between HPO and GO terms

protbench

selformer

SELFormer: Molecular Representation Learning via SELFIES Language Models

selformer_back

SELFormer: Molecular Representation Learning via SELFIES Language Models

transprsfp

website

Website for HU Biological Data Science Laboratory