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ctapobep avatar ctapobep commented on July 1, 2024

Noticed a cut-off frequency in the code, which depended on the signal length. Changing it to 0.9 did have an effect:
fc09

Though still not satisfactory at the beginning and at the end of the chromatogram. Is this fixable with tuning of other params or these artifacts can't be fixed with BEADS?

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hsiaocy avatar hsiaocy commented on July 1, 2024

Hi ctapobep,
Thanks for adopting this algorithm, but I'm regretfully to say that I didn't spend much time on this algorithm. Perhaps you could try different parameters because I tried it originally for comparing against Wavelet Transform and Hilbert-Huang Transform in the electrocardiogram.
That's why I'm so sorry that I cannot explain detail for you.

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ctapobep avatar ctapobep commented on July 1, 2024

Ok, got it, thanks. Did you decide in the end to use BEADS instead of other alternatives for baseline correction?

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hsiaocy avatar hsiaocy commented on July 1, 2024

Yes, for my research of electrocardiogram pre-processing, I eventually used HHT because it speeds up the whole working flow.
I have no base about chromatogram but just giving you a suggestion.

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