Comments (6)
JorySchossau
commented on June 4, 2024
Conversation w/ Cliff -> Localize MABE dir and no copying would be necessary.
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cliff-bohm
commented on June 4, 2024
Is this a good topic for next weeks MABE meeting?
…On Thu, Feb 1, 2018 at 3:27 PM, Jory Schossau ***@***.***> wrote:
Conversation w/ Cliff -> Localize MABE dir and no copying would be
necessary.
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BEACON Center for the Study of Evolution in Action
Michigan State University
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JorySchossau
commented on June 4, 2024
Yes, as there were arguments against each decision.
On Fri, Feb 2, 2018 at 9:02 AM, Clifford Bohm <[email protected]>
wrote:
… Is this a good topic for next weeks MABE meeting?
On Thu, Feb 1, 2018 at 3:27 PM, Jory Schossau ***@***.***>
wrote:
> Conversation w/ Cliff -> Localize MABE dir and no copying would be
> necessary.
>
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> <#122 (comment)>,
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H62rFdw0-9DnoQIks5tQh40gaJpZM4R2M3u>
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Cliff Bohm - Evolving Systems Technologist
BEACON Center for the Study of Evolution in Action
Michigan State University
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JorySchossau
commented on June 4, 2024
We decided on requiring all files specified must be at or below the same dir level as MABE the MQ call dir. When running on the HPCC the path to each file will be recreated (thus the earlier requirement) and if you need other files outside this requirement, then make it fit the requirement by using symlinks.
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cgnitash
commented on June 4, 2024
So this issue is resolved?
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JorySchossau
commented on June 4, 2024
The folder structure should be recreated on compute nodes for all files specified in MQ by user.
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Related Issues (20)
- MABE acronym HOT 4
- templates for modules HOT 1
- max readDouble value? HOT 1
- mbuild relies on being run from the mabe dir
- UPDATE_MTree::makeCopy() returns make_shared<RANDOM_MTree>
- Islands Optimizer requires Lexicase HOT 3
- mq.py CONSTANT doesn't handle quotes around parameters
- mq.py generated sbatch files fail when parenthesis are in un-quoted string parameters HOT 1
- Circular_Genome-mutationPointOffsetRange causes segfault HOT 7
- update MQ local mode to use parallel process scheduling
- new world template has wrong naming for existing parameters
- new brain template has vestigial 'CleanBrain' type causing build error
- fix brain API to be set/get or read/write, not set/read HOT 2
- regression compile error WireBrain
- Islands optimizer segfaults
- Lexicase injects newlines in output
- World Template broken (fails to compile)
- Brain Template also broken same way
- mq indevinate mode runs forever on short jobs
- mbuild -f overwrites the modules.txt file
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