Related Issues (20)
- Pretraining runtimes from the paper HOT 1
- hyenaDNA for regression? HOT 1
- How to define which dataset to use in command?
- The tokenizer's bug in Huggingface HOT 1
- How to recreate the result of DNABERT in paper HOT 1
- How to convert the batch cell from the GenomicBenchmarks data to user data? CUDA memory overload if running "Single example" cell multiple times to produce embeddings.
- How to pre-train on custom dataset using hyena-dna
- need to swap layer norm op for triton-based layer norm? HOT 2
- Reproducing the HyenaDNA results on NT Benchmarks
- Running with standard Huggingface config and trainer files does not give optimal results
- The default for pretrained_model_path in config files is a personal directory
- Bugs when I try to access the embeddings HOT 3
- Question: How to generate DNA sequence or sequence embeddings based on own bed file
- How can I access the dataset--genomic_benchmark I got timeout issue
- Failure to reproduce the hyenaDNA reported results on NT tasks. HURRY! HURRY HURRY
- Symbol lookup error
- Error when Resuming pre-training
- Training loss becomes NAN during pretraining HOT 1
- Questions about pre-training with multiple sequences HOT 1
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from hyena-dna.