Hari Sadasivan's Projects
Classifier for metagenomic sequences
Simple demonstration of separable convolutions
Legacy OpenCV Machine Learning Examples (2.4.x, C++)
Accelerated Dynamic Time Warping for ONT Read Until
Event detection for nanopore sequencing
fast-cpp-csv-parser
A C++ header-only library for reading Oxford Nanopore Fast5 files
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html
Hari's Homepage
prints top n kmers and frequency from piped input
Predictive kmer models for development use
Long Read Assembler
Scripts to download genomes from the NCBI FTP servers
python logistic regression demos
Complements Minimap2 for a fast and efficient Read-Until pipeline