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adventofcode

anovas

R Scripts for running 1-Way and 2-Way (with or without repeated measures) ANOVAs

api_toolbox

scripts for api calls

blog

Repository for N-Coding.net

challenges

A collection of quick scripts to solve technical challenges

clampfit_trace_selector

Function to generate a selection of traces for Clampfit raw trace analysis

data_challenges

Data challenges completed

datasciencecoursera

Working repository for certification classwork

datasharing

The Leek group guide to data sharing

ephyspy

Custom scripts for the most common tasks in multi-electrode electrophysiology

gaming

Scripts and notebooks for theorycrafting in online video games

getting_and_cleaning_data

R code and Technical Documentation for getting data from online respositories, cleaning the data according to Tidy Data principles, and calculating summaries of the data..

gwi140091

Custom R and Python code for DoD GWI140091

gwpythonscripts

Python scripts for analyzing data for the GWI project 2017-2018

heart_rate_variability

Automated analysis of multi-channel ECG, EMG, and EEG recordings

hello-world

Just another repository

insight_data_science

SubScript: A web app for retaining customer loyalty with curated content. Insight Data Science Fellowship Project.

io_curve_descriptive_stats

Descriptive statistics for input/output curves (slope and fiber volley)

ltp_analysis

Python 2.7 program to analyze electrophysiological data from a long-term potentiation experiment. This program assumes raw data is in an xlsx file as follows. Row 1= Experiment Name, Rows 2-31 = Raw slopes of baseline, Rows 32+ = Raw slopes of post-induction. Assumes no empty cells in dataset, but may change that.

matlab-ephys-analysis-suite

A collection of handy routines for analyzing raw slope/peak/fitting data from Clampfit or similar software. Includes IO curves, PPR (raw and indexed data), LTP, LTD, Spontaneous PSC (frequency, amp, average, cumalitive prob), and NMDA/AMPA. Works on PC and OS 10 Yosimite.

membrane_properties

Python program to analyze Input Resistance and Capacitance from seal tests in whole-cell patch clamp

mltools

mountainsort_examples

Examples of using MountainSort spike sorting software.

nerds_of_prey

neurolucida360excelfilereader

Analyzes and collates the most frequently reported measurements from Neurolucida360 "all branched analysis" excel exports.

neurolucidasheetsorter.r

Updated Data Extractor for Neurolucida for the Powell Lab

paired_pulse

A python program to analyze an excel spreadsheet with raw data from a paired pulse electrophysiology experiment.

patch_clamp

Collection of Python scripts for analyzing patch clamp electrophysiology experiments without Clampfit (Mac/Linux compatible)

ppranalyzer

A Matlab version of the original python scripts upgraded with a GUI interface for better user experience.

programmingassignment2

Repository for Programming Assignment 2 for R Programming on Coursera