Comments (2)
I have created a very simple PR for your code. It is working for me.
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There are a number of differences between openbabel 2 and 3 (which are in addition to the way pybel is invoked). The current version of ChemML works with openbabel 2 (not 3), which you can install from the openbabel channel (not the conda-forge channel). We will update the documentation to the clarify dependencies and versions soon.
We are also working towards an upgrade to bring ChemML up to speed with the latest versions of all of our external dependencies. Meanwhile, I would strongly suggest you to use Openababel 2.
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Related Issues (8)
- Wrong import of pybel HOT 1
- select the test set for the Active Learning manually HOT 2
- can we save a trained active learning model? HOT 1
- GeneticAlgorithm function fitness argument does not check number of inputs
- Directly feed ChemML with a RDKit molecule (object) HOT 2
- from chemml import wrapperRUN HOT 1
- chemML cant read XYZ format as string HOT 1
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