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Gianvito Urgese's Projects

caffe icon caffe

Caffe for Structurally Sparse Deep Neural Networks

cereal icon cereal

A C++11 library for serialization

deep-review icon deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

foldatlas icon foldatlas

A repository for genome-scale RNA structure probing data

ipknot icon ipknot

Integer programming based prediction of RNA secondary structures with pseudoknots

lara icon lara

LaRA 2: Lagrangian Relaxed structural Alignment

laragu icon laragu

The new version of Lara tool for the structural-alignment of RNA sequences

lava icon lava

A Software Framework for Neuromorphic Computing

ncov icon ncov

Nextstrain build for novel coronavirus SARS-CoV-2

scripts icon scripts

My scripts - primarily using python and appscript

seqan icon seqan

SeqAn's official repository.

seqan3 icon seqan3

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

smrnaseq icon smrnaseq

A small-RNA sequencing analysis pipeline

squigglekit icon squigglekit

SquiggleKit: A toolkit for manipulating nanopore signal data

zynqnet icon zynqnet

Master Thesis "ZynqNet: An FPGA-Accelerated Embedded Convolutional Neural Network"

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