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Alex's Projects

acgt icon acgt

Another Computational Genomic Tool. Bioinformatic tools written in C, essentially focused on genomics. The main purpose is learning, so it's first goal is not to be used in research projects. (maybe one day ...)

bash icon bash

bash configuration files

batch_cmd icon batch_cmd

Utility to launch multiple shell commands in parallel

biogrid icon biogrid

Graph biogrid interactions and manual functional annotations

crg icon crg

repository to store all code written for the project at the CRG

cv icon cv

Curiculum Vitae

eclust icon eclust

Clustering by genetic algorithm

fisa-vim-config icon fisa-vim-config

my vim configuration (lot of python, autocompletition, fuzzy finder, debugger, ...)

ggbio icon ggbio

Unofficial mirror of the svn repository of the ggbio package (http://tengfei.github.com/ggbio/)

git-extras icon git-extras

GIT utilities -- repo summary, repl, changelog population, author commit percentages and more

gitflow icon gitflow

Git extensions to provide high-level repository operations for Vincent Driessen's branching model.

gnode icon gnode

node.js based genome browser

hyptools icon hyptools

Automatically exported from code.google.com/p/hyptools

j.nome.s icon j.nome.s

A lightweight genome browser entirely written in javascript.

jade icon jade

Jade - robust, elegant, feature rich template engine for nodejs

jbrowse icon jbrowse

Modern JavaScript-based Genome Browser

jsom icon jsom

Self Organizing Maps in Julia

labnote icon labnote

An electronic lab notebook based on expressjs and backbone

logcmd icon logcmd

A command line tool to automatically fill a commented logbook

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