gongyh Goto Github PK

annot2pathologic

bioconda-recipes

Conda recipes for the bioconda channel.

car-detection-yolo

Autonomous driving - car detection using the very powerful YOLO model

containers

Series of containers

cwp

chronic widespread musculoskeletal pain analysis with genetics and glycomics

deeploc

This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content microscopy data with deep learning"

deepsplice

DeepSplice: Deep Classification of Novel Splice Junctions Revealed by RNA-seq

deershare

小鹿快传，一款在线P2P文件传输工具，使用WebSocket + WebRTC技术

deno

doubletd

example-raman-spectral-analysis

General data analysis workflow for Raman spectra according to the manuscript 'Tutorial on Chemometric Analysis in Raman Spectroscopy: from Experimental Design to Machine Learning based Modelling'

extract-intron-from-gff3

This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.

eztree

A Perl pipeline for identifying marker genes and build phylogenetic trees for a set of genomes

fithic

Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.

glm_po2pls

Supervised PO2PLS

gongyh

gongyh.github.io

macos

test softwares in MacOS

metaron

Metagenomic opeRon Prediction pipeline. MetaRon presents the first pipeline for the prediction of metagenomic operons without any functional or experimental data.

metawrap

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

mgpgtools

Tools for microbial graph pangenomes

mini-metagenomic_analyses

mminp

Microbe-Metabolite INteractions-based metabolic profiles Predictor

monovar

Single nucleotide variant (SNV) detection and genotyping algorithm for single-cell DNA sequencing data

multi-package-containers

Testing building mulled containers for multi-requirement tools.

nanocorr

Error correction for Oxford Nanopore data

nextjs-toolbox

nf-core-scgs

Single Cell Genome Sequencing data analysis pipeline

nf-core-scp

Single Cell guided Pangenome analysis pipeline using SPAdes, CheckM, GTDB-Tk, Prokka, Roary and extensive quality control.

opennmt-py

Open Source Neural Machine Translation in PyTorch