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followers: 2.0 following: 15.0 repos: 26.0 gists: 1.0

Name: Gopal Srivastava

Type: User

Company: Louisiana State University

Bio: Graduate Student @ Louisiana State University

Twitter: GopalSr59598876

Location: Baton Rouge, LA

Blog: https://sites.google.com/view/srivastava-gopal/home

👋 Hi!, I’m Gopal Srivastava, a Biological Sciences PhD student at LSU
🔭 I’m currently working on predicting drug pair synergy prediction and cancer susceptibility prediction using graph neural networks
👀 I’m interested in using data science and machine learning to solve bio relevant problems
🌱 I’m currently learning cancer genomics and utilizing bioinformatics tools for GWAS data processing
👯 I’m looking to collaborate on GWAS based machine learning studies
📫 How to reach me: [email protected]

Gopal Srivastava's Projects

analysis_for_synergy_data_augmentation

This repository provide the analysis process for the synergy data augmentation. It produces all the figures for the analysis process in the paper.

bioinformatics_learn

This is a repository of codes written during the Bioinformatics specialization.

books

cancer

deep-learning-books-1

Books for machine learning, deep learning, math, NLP, CV, RL, etc

ec_class

This project is under development

gexf-

gnsrivastava

My personal repository

gogo

An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms

graphsite-classifier

Ligand-binding site classification with deep graph neural networks.

hig2vec

html-css-js

image_project

ml-mipt

Machine learning course at MIPT

oboder

Small library for reading OBO files.

oob

Object Oriented Programming

ppi-distance

pydata-book

Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media

pythoncrashcourse

JimShapedCoding Python Crash Course 2021

pythonoop

The Original Code repository for my Python OOP Series

researchgopal.github.io

rosalind

These are ROSALIND project problems. Rosalind is a platform for learning bioinformatics and programming through problem solving.

runalphafold

Wrapper script for running Alphafold on LSU HPC clusters

synergy-data-augmentation

Test the augmented synergy data with random forest and gradient boosting trees

team-ski

Supporting Information of Publications

toxim

This is a toxicity prediction tool

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