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annelidamitogenomes

This repository contains the scripts used to conduct the analyses of annelid mitochondrial genomes. The description how the scripts have been used can be found in the paper itself.

apollo

Apollo（阿波罗）是携程框架部门研发的分布式配置中心，能够集中化管理应用不同环境、不同集群的配置，配置修改后能够实时推送到应用端，并且具备规范的权限、流程治理等特性，适用于微服务配置管理场景。2019年度最受欢迎**开源软件评选中，请为apollo投上你的宝贵一票：https://www.oschina.net/project/top_cn_2019

apollo-1

An open autonomous driving platform

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bcbiornaseq

R package for bcbio RNA-seq analysis.

beautiful-visualization-with-r

《R语言数据可视化之美》配套代码

beginning-perl-for-bioinformatics

Beginning Perl for Bioinformatics · 生物信息学 Perl 语言入门（中文版）

bio

Bioinformatics utilities.

bio-learning

biofx_python

Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)

biopython

Official git repository for Biopython (originally converted from CVS)

biostar-central

Biostar Q&A

biostar-handbook

Issue tracker for the Biostar Handbook

brassica-napus-bulk-segregant

Scripts used to perform bulk segregant analysis in Brassica napus

bsa

Bulked-Segregant Analysis using vcf file with or without parents

bsa_brassica_napus

This repository including scripts for Bulk Segregant Analysis with B.napus

bsatos

Bulked segregation analysis tools for outbreeding species(BSATOS)

callmom

Python script for calling SNPs, MNPs, and indels in mitochondrial DNA.

circlize

Circular visualization in R

clusterprofiler

:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

colabfold

Making Protein folding accessible to all!

covid-19

Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE

covid-19-data

An ongoing repository of data on coronavirus cases and deaths in the U.S.

covid-19-genome-sequencing-and-predictions-with-artificial-intelligence

Genome sequencing with deep learning and other artificial intelligence methods

covidexposureindices

Exposure indices derived from PlaceIQ movement data by Couture, Dingel, Green, Handbury, and Williams

deepbsa

DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.

demo2

learn how to use git2

direct-rna-sequencing

Nanopore based RNA-Seq pipeline for viral samples

dxy-covid-19-data

2019新型冠状病毒疫情时间序列数据仓库 | COVID-19/2019-nCoV Infection Time Series Data Warehouse