Some PR identifiers are not making it into the final (GOlr pipeline) product about neo HOT 12 CLOSED

...weird, we just did an update

in the GPI:

PR      000050230       mAKT2/iso:1/Phos:1      RAC-beta serine/threonine-protein kinase isoform 1 phosphorylated 1 (mouse)             protein taxon:10090     MGI:MGI:104874

Change TEST_SRCS = mgi

~/local/src/git/neo[master]$:) PATH=/home/sjcarbon/local/src/git/owltools/OWLTools-Runner/bin:$PATH make test_obo

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Sorry; do you mean the two I list are not in the GPI used?

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@hdrabkin Could you check to see if these are available now?

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I just checked these two and they are both available in FORM and GRAPH.
Did this use the most recent MGI GPI? I can ask Li and Karen to try anything they have recently requested also.

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I confirmed that this ID, PR:Q3V365, which was created on 3/10/20, was available in both the Form and the Graph.

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I have confirmed PR:000050230 is now available (Jan 2020 request)

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Li just confirmed that a new request PR:000050231 is now also available in Noctua

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@hdrabkin Okay, great--we seem to have a building method that is more sensible now.

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Current problem list from @hdrabkin

PR:000050486
name: alanine--tRNA ligase, cytoplasmic isoform 1 methylated 1 (mouse)

PR:000050487
name: alanine--tRNA ligase, cytoplasmic isoform 1 unmethylated 1 (mouse)

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@hdrabkin These seem to be in the system, albeit under different names:

http://noctua-amigo.berkeleybop.org/amigo/term/PR:000050486
http://noctua-amigo.berkeleybop.org/amigo/term/PR:000050487

They both appear in the dropdown for me.

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I tried Monday but now they ARE there; Sorry. You can close this. Thanks Seth!

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@hdrabkin No worries. It is a little odd though. We rolled out (two separate) new release for NEO on Thursday and Friday last week, after a long hiatus due to a conflict upstream. If you were still having issues on Monday, I wonder if something might be getting cached somewhere along the way...

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