gaow Goto Github PK

annotation-finemap-dsc

Explore how annotation helps with fine-mapping

ashr

An R package for adaptive shrinkage

beamer

markdown->beamer templates for pandoc

bioworkflows

In-house computational biology workflows at Columbia Neurology

cnv-gene-mapping

Develop methods that leverage copy number variations (CNVs) for gene mapping

computational-genomics-r

cyclingstatistician

Learning, biking, repeating.

dentist

DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.

docker

docker files

dotfiles

Forked from Daniel Nachun's dotfile repo

dsc

Repo for Dynamic Statistical Comparisons project

dsc-mashr

DSC for mashr related investigations

dsc-susie-corr

Benchmarking behavior of highly correlated variables in SuSiE

eqtlbma

Package to detect eQTLs jointly in multiple subgroups (e.g. tissues) via Bayesian Model Averaging.

extreme-deconvolution

Density estimation using Gaussian mixtures in the presence of noisy, heterogeneous and incomplete data

fast-lmm

Python version of Factored Spectrally Transformed Linear Mixed Models

fastqc-nf

A nextflow demo

fastreg

Fast vectorised linear regression in Python

fine-mapping

Genetic fine-mapping pipelines using tools from Chicago

flashier

A faster and angrier package for EBMF. In progress.

genomic-selection

gtex-pipeline

GTEx & TOPMed data production and analysis pipelines

hierinf

ipynb-html-encrypted

Convert ipynb to encrypted HTML file for sharing with private parties

ismb-2018

VAT tutorial for ISMB 2018

jsnes

A JavaScript NES emulator.

jupyter-book

Create an online book with Jupyter Notebooks and Jekyll

jupyterbook-sos-demo

Example repo for jupyter book with SoS notebooks

jupyterlab-sos-feedstock

A conda-smithy repository for jupyterlab-sos.

kbac

KBAC Statistic Implementation