Name: Cameron Gilchrist
Type: User
Bio: Postdoc @ Steinegger Lab, Seoul National University
Ex. Chooi Lab, The University of Western Australia
Twitter: clmgilchrist
Location: Perth, Western Australia
Blog: http://www.chooilab.org
Cameron Gilchrist's Projects
Automatic Assembly For The Fungi
Perl script for manipulating trees after phylogenetic reconstruction
Miscellaneous scripts for genome annotation
Conda recipes for the bioconda channel.
A simple demo to show usage of the Mozilla Browser API. See https://developer.mozilla.org/en-US/docs/Web/API/Using_the_Browser_API for more details.
Find clustered hits from a BLAST search
Scripts used in benchmarking MultiGeneBlast and cblaster
Gene cluster comparison figure generator
A reusable d3 legend component.
The Python micro framework for building web applications.
Foldseek enables fast and sensitive comparisons of large structure sets. It reaches sensitivities similar to state-of-the-art structural aligners while being at least 20,000 times faster.
Fungal Ribosimally synthesized and Post-translationally modified Peptide (RiPP) assayer
Eukaryotic Genome Annotation Pipeline
Fungal marker-based phylogenetics toolkit
Parse GenBank/GFF3 to JSON
C library for high-throughput sequencing data formats
MMseqs2: ultra fast and sensitive search and clustering suite
MMseqs2 app to run on your workstation or servers
Interactive viewer of phylogenetic trees
Starter repo for getting up-and-running with React, Flask, webpack, and Babel.
Parse NCBI CD-search results to find and visualise the domain architecture of secondary metabolite synthases
Re-usable D3 chart used in synthaser visualisation
Python scripts used in synthaser manuscript
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent