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Florian Leitner's Projects

asdm-tm-class icon asdm-tm-class

Course material for the Madrid ASDM class on text mining (C09)

bais icon bais

BioNLP Annotation Interoperability Server

bceval icon bceval

BioCreative Evaluation Scripts and Library

bert icon bert

TensorFlow code and pre-trained models for BERT

brat icon brat

brat rapid annotation tool (brat) - for all your textual annotation needs

capsule-text-classification icon capsule-text-classification

利用keras搭建的胶囊网络（capsule network文本分类模型，包含RNN、CNN、HAN等，其中keras_utils包含了capsule层和attention层的keras实现

chemcheck icon chemcheck

a syntax checker for BioCreative IV CHEMDNER task annotations

classipy icon classipy

A command-line tool to develop advanced text classifiers using SciKit-Learn.

couchpy icon couchpy

a python3 library to programmatically access CouchDB (written when there was none, "long ago"...)

dawg icon dawg

DAWG-based dictionary-like read-only objects for Python. Based on `dawgdic` C++ library.

dictionary icon dictionary

a (unfinished work-in-progress) MADFA dictionary in Go

factorie icon factorie

fork to fix the hang when using the socket server for NLP

fastai icon fastai

The fast.ai deep learning library, lessons, and tutorials

geniatagger icon geniatagger

- part-of-speech tagging, shallow parsing, and named entity recognition for biomedical text -

gnamed icon gnamed

a tool to manage a unified repository of gene and protein names, symbols, keywords, literature references, and species associations

go icon go

Golang source code collection

lexikos icon lexikos

a minimal acyclic deterministic finite state automaton (MADFA)

libfnl icon libfnl

Python 3 tools for data mining in molecular biology

libfsmg icon libfsmg

A finite state machine library for pattern matching on generic types in Java sequence containers.

medic icon medic

a Python 3 command-line tool to maintain a DB mirror of MEDLINE (https://pypi.python.org/pypi/medic) - ALERT: As I have moved out of science and am working as a consultant now, this project might need a new maintainer once PubMed changes its XML format. Heroes?

neuroner icon neuroner

Named-entity recognition using neural networks. Easy-to-use and state-of-the-art results.

onlinetaggerframework icon onlinetaggerframework

an online tagger wrapper for GATE that only spans one global sub-process per processing resource

otplc icon otplc

A tool to convert corpus annotations between the brat annotation and OTPL formats.

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