Comments (3)
sahilseth
commented on May 24, 2024
Add a test case for the same
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wisekh6
commented on May 24, 2024
Hi Sahil,
How are you?
I also had a similar issue when I tried to kill flow with a single job.
kimh@helix180:/projects/kimh$ flowr kill x=/gpfs/ctgs0/fastscratch/kimh/flowr/runs/glass_tools/flowname-TCGA-TQ-A7RV-TP-21-NB-01D-WGS__TCGA-TQ-A7RV-TP-21D-WGS-TR9682-20181218-01-52-59-zQCVFNv3
killing 1 jobs, please wait... See kill_jobs.out in the wd for more details.
Error in txtProgressBar(style = 3, min = 1, max = length(cmds)) :
must have 'max' > 'min'
Error in funr(args = commandArgs(trailingOnly = TRUE), script_name = "flowr", :
Execution halted
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sahilseth
commented on May 24, 2024
It should be a simple fix; will take a look at this.
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Related Issues (20)
- rerun ignores platform, when specified via run command HOT 1
- Add status column in the flow_details from the beginning
- Simplify the configuration setup HOT 1
- Pattern matching in kill is not always as expected
- issue with to_flow, if a data.frame is supplied, instead of a flowmat.
- relax flowr's default directory structure.
- flowr flowdef bug while running scatter-gather approach HOT 2
- sge conf should be pbs? HOT 3
- Job execution on remote grid node HOT 2
- LSF CPU/core/thread request HOT 1
- Installing flowr fails from github - diagram pkg - Invalid comparison operator in dependency HOT 1
- error in dependent job tabulation in flow_details.txt for scatter type jobs HOT 1
- How to integrate flowr and dplyr HOT 1
- modifying commands/resources before re-running HOT 1
- Issue with recent R version, when creating a flowmat HOT 2
- automatically subset flowmat, incase of `rerun` HOT 2
- docs.flowr.space domain expired HOT 2
- it fails on slurm HOT 1
- module_cmds missing in rerun
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