Comments (2)
Thank you for the detailed report!
The installation script was broken - it should be fixed now in the latest git version (you can use 'git pull' to update). You can also run Flye without installation ("bin/flye"), which should work fine in both versions.
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Great, that worked!
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Related Issues (20)
- Using fly to detect contamination in a pure culture? HOT 1
- Flye install fails with Python 3.12 HOT 2
- Command '['flye-modules', 'assemble', '--reads' HOT 2
- Better assembly with partial reads than full dataset HOT 2
- Positive and Negative Sense concatenating together for each contig HOT 16
- Flye output only 1 contig HOT 2
- Inclusion of reads <5000 results in increased fragmentation of assembly HOT 2
- How does Flye resolve 'unbridged' repeats? HOT 3
- No disjointigs were assembled(WARNING: No overlaps found - unable to estimate parameters)
- Best parameter for nanopore R9 HOT 6
- direct RNA Seq data with flye? HOT 1
- Metagenome HOT 1
- corrupted double-linked list HOT 3
- Meanings of both '--keep-halotypes' and '--no-alt-contigs'. HOT 7
- free(): invalid next size (fast) at "Simplifying the graph" HOT 4
- Assembly of complex genomes with high rate of genome rearrangements HOT 2
- Anomaly in resource usage HOT 7
- What parameter for R10.4.1 FAST mode data HOT 1
- Can't resume from a definite polishing step ? HOT 4
- flye usage HOT 1
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