feiyoung Goto Github PK

cmgfm

Covariate-augmented generalized factor model

coap

High-Dimensional Covariate-Augmented Overdispersed Poisson Factor Model

dr-sc.analysis

Codes for analysis of DR-SC

dr.sc

DR.SC: Joint dimension reduction and spatial clustering for single-cell/spatial transcriptomics data

fast

FAST: a fast and scalable factor analysis for spatially aware dimension reduction of multi-section spatial transcriptomics data

fast_analysis

feiyoung.github.io

personal website

feiyoung.netlify.com

Personal Blog

gfm

Generalized factor model for ultrahigh dimensional mixed-type data

ilse

Iterative Least Square Estimation or Full Information Maximum Likelihood Estimation for Linear Regression When Data Include Missing Values.

isc.meb

Integrate spatial clustering analysis with hidden Markov random field using empirical Bayes

mgfm

Generalized Factor Model with MATLAB version

mig

High-dimensional large-scale mixed-type missing data imputation with missing at random

multicoap

High-Dimensional Covariate-Augmented Overdispersed Multi-Study Poisson Factor Model

npreg

Using nonparametric method to estimate regression function and its derivatives

nptvcmpd

omig

Online Missing Value Imputation for High-Dimensional Mixed-type Data via Generalized Factor Models

precast

an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batch effects.

precast_analysis

Main results in PRECAST

profast

Probabilistic factor analysis for spatially-aware dimension reduction across multi-section spatial transcriptomics data with millions of spatial locations

readpapers

Repository of read papers

spacoap

High-Dimensional Spatial Covariate-Augmented Overdispersed Poisson Factor Model

srtpipeline

srttools

Spatial Transcriptomics Tools Based on A Serirs of Our Developed Methods

tosi