falkohof Goto Github PK
Name: Falko Hofmann
Type: User
Company: @Lexogen-Tools
Twitter: falkohof
Falko Hofmann's Projects
atac-seq-pipeline
bash_scripts
bioconda-recipes
Conda recipes for the bioconda channel.
ciri-cookbook
Document for CIRI-series software
cluster-brainspan
R script for some literature thesis
comfi
hotspot
Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.
idemux
Idemux is a command line tool designed to demultiplex paired-end fastq files from QuantSeq-Pool.
inferelator
The official Inferelator repository maintained by current or former Bonneau lab members
intervaltree
A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment.
menogg-excercise
mscentipede
A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.
nf-te-rna-seq
nucleoatacr
R package for reading in & working with NucleoATAC outputs
peanut
rna_seq_kallisto1
nextflow pipeline for single read rna-seq
rsem-rna-seq-pipeline
sh3bindingdomainfinder
tool for my masterthesis
tfbs-analysis-utils
transcription-factor-db-merger
https://gitlab.com/nodine-lab/transcription-factor-db-merger
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