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Fabio Tordini's Projects

ampumi icon ampumi

Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)

daiquiri icon daiquiri

Python library to easily setup basic logging functionality

downsampling-fastqs-and-bams icon downsampling-fastqs-and-bams

Code for Downsampling both FASTQs and BAMs (used in Hughes, Wadsworth, Gierahn et al 2020 to benchmark Seq-Well S^3 and 10x V3)

gitignore icon gitignore

A collection of useful .gitignore templates

mfastflow icon mfastflow

Clean and minimal FastFlow repository containing only library headers

nuchart icon nuchart

NuchaRt fosters a gene-centric, graph-based representation of genomic data resulting from next-generation, high-throughput DNA sequencing techniques. NuchaRt provides functions and tools for the analysis of such data, ensuring high-performance and good usability.

plastic_workflows icon plastic_workflows

Scientific Workflows on Clouds with Heterogeneous and Preemptible Instances

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