Can the io.html package be removed now? about exomiser HOT 2 CLOSED

Hi Jules,
I think we need to replace our local code base here in Berlin and we should al switch to the new package, so yes, they can be removed. We should chat about how to get the functionality into the new codebase. In partciular, I had a relatively simple window for adding HPO terms to Phenix with PHP and a %xxx% SQL query, but it would be much nicer to use something like solr and to make the website look nicer.
-peter

Dr. med. Peter N. Robinson, MSc.
Professor of Medical Genomics
Professor in the Bioinformatics Division of the Department of Mathematics and Computer Science of the Freie Universität Berlin
Institut für Medizinische Genetik und Humangenetik
Charité - Universitätsmedizin Berlin
Augustenburger Platz 1
13353 Berlin
Germany
+4930 450566006
Mobile: 0160 93769872
[email protected]
http://compbio.charite.de
http://www.human-phenotype-ontology.org
Introduction to Bio-Ontologies: http://www.crcpress.com/product/isbn/9781439836651
I have learned from my mistakes, and I am sure I can repeat them exactly
ORCID ID:http://orcid.org/0000-0002-0736-9199
Scopus Author ID 7403719646
Appointment request: http://doodle.com/pnrobinson

Von: Jules Jacobsen [[email protected]]
Gesendet: Donnerstag, 18. Dezember 2014 12:51
An: exomiser/Exomiser
Cc: Robinson, Peter
Betreff: [Exomiser] Can the io.html package be removed now? (#6)

This package has now been rendered redundant for the core exomiser-cli functionality as the latest changes in release 5.2.0https://github.com/exomiser/Exomiser/releases/tag/5.2.0 are using Thymeleaf to render the HTML and the HtmlWriter simply hands the context with the data it needs to the rendering engine which fills in the resources/html/templates/results.html with this data.

@pnrobinsonhttps://github.com/pnrobinson - Do you still need it for Panel, CRE and Walker? If not then this package has served it's purpose and it's time to retire it from the codebase. Let me know and I'll take care of it.

—
Reply to this email directly or view it on GitHubhttps://github.com//issues/6.

from exomiser.

Excellent, thanks Peter. If you look at the exomiser-web package you can see how I'm doing that sort of thing. I found a nice javascript library - js-chosen which will filter these sorts of things.

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