Comments (8)
Yes, we are not using cuda. For now, I guess I just need to pass the correct index-url for cu121. I noticed, I was passing the index-url for cu113
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@DhanshreeA Thanks for checking. The issue with the installation of reinvent is fixed.
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/approve
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New Model Repository Created! 🎉
@ankitskvmdam ersilia model respository has been successfully created and is available at:
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Hey @ankitskvmdam what is the status of this one? Thanks!
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Hi @miquelduranfrigola ,
Finished working on this just now. main.py
runs smoothly without any issues. The model is also functioning effectively. I validated its performance by generating 8000 molecules (1000 molecules per input smiles), which took approximately 12 minutes.
Facing some issue when I am using ersilia fetch
command. I also noticed that I am not able to fetch old reinvent models (like eos694w
). I suspect there is some change from REINVENT that is causing the build to fail. I will look into it soon.
REINVENT updates their dependencies last week (MolecularAI/REINVENT4@915ec4c#diff-d30f07d3b5c96037dfa1d196cb69cd4357dfea99c425a170c8ebab83368ffa3cL246):
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Thanks for the update! I see... Perhaps @DhanshreeA can assist with this. It is possible that building with Docker doesn't work with cuda.
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@ankitskvmdam just checking, any help that you need from me?
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Related Issues (20)
- 🐛 Bug: log file not found warning after using the track flags
- 🐛 Bug: Fetching models on MacBook (M1) results in 404 error due to looking for linux/arm64 HOT 1
- 🐕 Batch: Define Model Installs through a YAML file instead of a Dockerfile HOT 3
- 🐕 Batch: Resource monitoring with different input scenarios and systems HOT 2
- 🐛 Bug: Numpy versions conflicts HOT 2
- 🐛 Bug: Tracking functionality does not work when a result CSV file is not specified
- 🐛 Bug: Performance Metrics Fail for String Output Model HOT 4
- 🐛 Bug: Ersilia close when model serving is interrupted HOT 2
- 🦠 Model Request: Cardiotoxicity Classifier HOT 13
- 🦠 Model Request: Demo Malaria Model HOT 8
- 🦠 Model Request: Predict bioactivity against Main Protease of SARS-CoV-2 HOT 25
- 🦠 Model Request: Unit Test Model Compound HOT 3
- 🦠 Model Request: QupKake: predict micro-pKa of organic molecules HOT 31
- 🐈 Task: Remove dead code from ersilia
- 🐈 Task: Inconsistency between current licenses recognized by Ersilia vs those maintained in Airtable HOT 5
- 🐛 Bug: Ersilia fetch breaking especially when inside docker containers
- 🐈 Task: Reflect correct values in information.json HOT 5
- 🐈 Task: Ersilia tries to close docker containers when any model is fetched, even if from source
- 🦠 Model Request: Unit Test Model Compound HOT 3
- 🐛 Bug: Ersilia Test Command: False Positive Test Failure HOT 1
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