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awesome-biomechanics

A curated, public list collecting resources for biomechanics and human motion: datasets, processing tools, software for simulation, educational videos, lectures, etc.

causal_salad_2021

One day course on causal inference, MPI-EVA 9 September 2021

cr1d

Confidence and prediction intervals for 0D and 1D data

crp_irregular_surfaces

Code to accompany the manuscript on continuous relative phase analysis of gait over irregular surfaces

datasciencecoursera

A repository for Data Science Course

datasharing

The Leek group guide to data sharing

exdata_plotting1

Plotting Assignment 1 for Exploratory Data Analysis

explaining-deep-clinical-gait-classification

Code and Data used for the paper "Explaining Machine Learning Models for Clinical Gait Analysis"

fda

MATLAB FDA repository developed by Jim Ramsay (his original code)

fda-pca-spm

Material associated with the 2018 Dublin seminar: "Advanced statistical analysis of biomechanical time series: PCA, FDA and SPM"

fdarely

Reliability measures for functional data

fdasrsf_python

elastic fda python code

gaitfeature

R package to detect features/pattern/deviations in kinematics curves from gait analysis

gaittrends

getting-and-cleaning-data-course-project

gramm

Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualizations. Gramm is inspired by R's ggplot2 library.

imu-sensor-placement-optimization

Data and code for analysis presented in Sensors journal manuscript titled "Optimization of IMU Sensor Placement for the Measurement of Lower Limb Joint Kinematics" by W. Niswander, W. Wang, and K. Kontson.

interpretable-deep-gait

Explaining the unique nature of individual gait patterns with deep learning

interpretable-emg-signatures

jumpsfda

Functional data analysis of countermovement jump data. It creates linear models from component scores based on a range of data processing techniques, including curve registration.

landingmfpca

lrp_toolbox

The LRP Toolbox provides simple and accessible stand-alone implementations of LRP for artificial neural networks supporting Matlab and Python. The Toolbox realizes LRP functionality for the Caffe Deep Learning Framework as an extension of Caffe source code published in 10/2015.

mdrqa

This repository contains additional resources to the article "Multidimensional Recurrence Quantification Analysis (MdRQA) for the analysis of multidimensional time-series: A software implementation in MATLAB and its application to group-level data in joint action", Frontiers in Psychology, by Wallot, Roepstorff & Mønster, as well as to the article "Analyzing Multivariate Dynamics Using Cross-Recurrence Quantification Analysis (CRQA), Diagonal-Cross-Recurrence Profiles (DCRP), and Multidimensional Recurrence Quantification Analysis (MdRQA) – A Tutorial in R" by Wallot & Leonardi

measuring_abnormality_in_high_dimensional_spaces

mokka

Open-source and cross-platform software to easily analyze biomechanical data

mwarp1d

Manual one-dimensional data warping and nonlinear registration in Python and PyQt

neuromechanics_course

Neuromechanics_Course_2020

nlreg1d

Code and data associated with nonlinear registration paper

o-reilly-federolf-2020

2d & 3d graphical representations

pace_matlab