Name: Francesco Padovani
Type: User
Company: Helmholz Zentrum Munich
Bio: Creator of the Bioimage analysis tool Cell-ACDC @SchmollerLab. Postdoc in cell biology, Engineer by training
Twitter: frank_pado
Location: Munich, Germany
I am Francesco Padovani and I'm the creator of the Bioimage Analysis tool Cell-ACDC. I'm a Postdoc in the Schmoller Lab interested in making AI accessible to everyone through user-friendly GUIs. Feel free to contact me with any questions or feedback about our tools!
anndata
Annotated data.
cell_acdc
A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
cellpose_omni
a generalist algorithm for cellular segmentation
chromrings
Python package to quantify chromatin reorganizaiton in C. Elegans upon starvation
core-bioimage-io-python
Python libraries for loading, running and packaging bioimage.io models
deepsea
An efficient deep learning model for single-cell segmentation and tracking of time-lapse microscopy images
elpadocan
My GitHub profile repository
episcanpy
Episcanpy: Epigenomics Single Cell Analysis in Python
fastsam
Fast Segment Anything
napari
napari: a fast, interactive, multi-dimensional image viewer for python
ncolor-acdc
Cell-ACDC implementation of ncolor used by omnipose
omnipose-acdc
Omnipose: a high-precision solution for morphology-independent cell segmentation
pombseen
Python implementation of pomBseen
pyqtgraph
Fast data visualization and GUI tools for scientific / engineering applications
pytorch3dunet
3D U-Net model for volumetric semantic segmentation
qtmodern
PyQt/PySide Widgets Modern User Interface
readthedocs-tutorial
Tutorial for read the docs
scikit-image
Image processing in Python
spec-bioimage-io
Specification for the bioimage.io model description file.
spotiflow
Accurate and efficient spot detection for microscopy data
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
stardist
StarDist - Object Detection with Star-convex Shapes
tapir
TAPIR: Tracking Any Point with per-frame Initialization and temporal Refinement
yeaz
An interactive tool for segmenting yeast cells using deep learning.
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
