eloydelas Goto Github PK

alps

Bash script to compute DTI-ALPS

amico

Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data

assemblynet

AssemblyNet: 3D Whole Brain MRI segmentation pipeline

blast-ct

Brain Lesion Analysis and Segmentation Tool for Computed Tomography

brainhance

Command-line tool to perform MRI upsampling via SuperResolution GANS

clinical-super-mri

Code for "Deep Attention Super-Resolution of Brain Magnetic Resonance Images Acquired Under Clinical Protocols".

cnn_ucl_mssg

CNN_UCL_MSSG

cornn_tractography

Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context

curriculum

deepbleed

DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials

deepdti

DeepDTI Tutorial

deeplearning-playground

Deep Learning courses, tutorials and examples with TensorFlow and PyTorch

deepneuro

A deep learning python package for neuroimaging data. Made by:

deepneuroseg

Deep-learning Tool for White Matter (WM) lesions and Claustrum structure segmentation in brain magnetic resonance imaging (MRI).

dkmri

Reproducible and efficient diffusion kurtosis imaging in Python.

dl-direct

DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation

dmri-rcnn

Diffusion MRI Recurrent CNN for Angular Super-resolution

dti-noddi

DTI-NODDI: Create NODDI maps from DTI (FA and MD or L1, L2, and L3)

dti_preproc

preprocessing scripts for diffusion imaging

eloydelas.github.io

fatbacpc

Brain Imaging Accessoires: Fully automatic tilting of brainscans to Anterior Commissure - Posterior Commissure line (fatbACPC).

graymatter_swissknife

Gray matter microstructure models estimator for diffusion MRI

hd-ms-lesions

Automated deep learning based Multiple Sklerosis brain lesions segmentation

hdngan

The keras implementation for HDnGAN (Hybrid Denoising Generative Adversarial Network)

intensity-normalization

normalize the intensities of various MR image modalities

interconverting-t1w-to-t2w-in-mri-using-cyclegan

In this group project of deep-learning course, we demonstrate implementation of CycleGan on upper airway and brain imaging. By applying GAN, we generate synthetic T2 weighted image from T1 weighted images.

kul_neuroimaging_tools

lesion-segmentation-challenge-miccai21

lod-brain

Fighting the scanner effect in brain MRI segmentation with a progressive level-of-detail network trained on multi-site data

mdt

Microstructure Diffusion Toolbox