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anvil-docker

Docker containers for Anvil Project

cromwell

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

data-consumer-vignettes

Simple walk-throughs of interacting with the DCP as a downstream data consumer.

data-portal

feb_1_practice

feb_2_practice

feb_9_practice

gatk4-exome-analysis-pipeline

This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and Indel discovery in human exome sequencing data.

gatk4-genome-processing-pipeline

Workflows used for processing whole genome sequence data + germline variant calling.

hello-world

Just another repository

horsefish

jan_24_practice

practice for jamboree

learn-wdl

Educational materials for learning WDL

markdown-portfolio

onboarding_sop

optimus_edits

Draft ReadMe and Other Docs

practice_2

terra-docker

warp

WDL Analysis Research Pipelines

wdl

Workflow Description Language - Specification and Implementations

wdl-docs

WDL usage documentation including introductory materials, tutorials and cookbook examples

wdl-docs-trial