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adipose-dysfunction-nafld

aidps

Artificial intelligence-derived prognostic signature

bypy

Python client for Baidu Yun (Personal Cloud Storage) 百度云/百度网盘Python客户端

clam

Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

colorectal_cancer_ai

conditional_ssl_hist

deep_learning_wsi_tutorial

deepattnmisl

Contains codes of DeepAttnMISL in MEDIA'20

deepslide

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

desmond

dsca

DSCA: A Dual-stream Network with Cross-attention on Whole-Slide Image Pyramids for Cancer Prognosis

dsmil-wsi

DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image

eocprognosis

genemutationfromhe

Gene mutation and pathway activity prediction from H&E slides

get_mr

A package for running MR In batches and in parallel quickly

gins

Gene interaction perturbation network deciphers a high-resolution taxonomy in colorectal cancer

hccs

Each sample would be partitioned into the corresponding subtype based on the nearest centroid method and Pearson correlation.

he2rna_code

Train a model to predict gene expression from histology slides.

histcode

Contrastive learning-based computational histopathology predict differential expression of cancer driver genes

histomorphological-phenotype-learning

Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Quesne J.*, Tsirigos A.*, and Yuan K.* Self-supervised learning discovers novel morphological clusters linked to patient outcome and molecular phenotypes. 2022'

ibmyes

image-forensics

PyTorch implementation of ImageForensics: https://hms-idac.github.io/ImageForensics/

image_forgery_detection

Reproduced Code for Image Forgery Detection papers.

imageforensics

Learning Manipulation-Invariant Image Similarity for Detecting Re-Use of Images in Scientific Publications

irls

Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal cancer

kinto

ms-prgenes

netbio

nhanesr

oh-my-tuna

Keep calm and use TUNA mirrors.