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Comments (8)

xylar avatar xylar commented on August 12, 2024 1

Thanks @minxu74. Using system mpi4py might be a possibility.

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chengzhuzhang avatar chengzhuzhang commented on August 12, 2024 1

@xylar and @minxu74 Thank you for taking a look! When I try it today, it worked. Must be some one time glitch yesterday.

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xylar avatar xylar commented on August 12, 2024 1

Okay, well that's a little disconcerting but hopefully it won't happen again. If it does, let's try to find out more. Using system mpi4py, if there is such a thing, might be an option.

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xylar avatar xylar commented on August 12, 2024

Hmm, @chengzhuzhang, this seems way outside my wheelhouse. Is there someone from the E3SM team we could bring in for some help? I'm happy to change the build as needed but I don't know where to begin.

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xylar avatar xylar commented on August 12, 2024

Just to be sure, this was run on a compute node, not a login node?

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chengzhuzhang avatar chengzhuzhang commented on August 12, 2024

I should clarify that this ilamb run is from e3sm-unified on compute nodes.

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chengzhuzhang avatar chengzhuzhang commented on August 12, 2024

There is not a ilamb-run executable in e3sm-unified on a login node. I'm wondering maybe @minxu74 could help take a look.
To reproduce, get a compute node:
srun -N 1 -t 01:00:00 --pty bash

source /lcrc/soft/climate/e3sm-unified/load_latest_e3sm_unified_chrysalis.sh
export ILAMB_ROOT=/lcrc/group/e3sm/ac.zhang40/ilamb_data
ilamb-run --config /home/ac.zhang40/ILAMB/src/ILAMB/data/cmip.cfg --model_root /lcrc/group/e3sm/ac.zhang40/ilamb_test_data/ --regions global

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minxu74 avatar minxu74 commented on August 12, 2024

@chengzhuzhang could you try the following command to see if it works?
srun -n 1 ilamb-run --config /home/ac.zhang40/ILAMB/src/ILAMB/data/cmip.cfg --model_root /lcrc/group/e3sm/ac.zhang40/ilamb_test_data/ --regions global bona

If it does not work, we may have to use system mpi4py, instead of the one installed by conda.

I do not have an account on LCRC machines, otherwise, I can look into it and try the above command.

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