dsurujon Goto Github PK

adaptation

Analysis scripts for adaptation WGS data pre-processed by breseq

awesome-machine-learning

A curated list of awesome Machine Learning frameworks, libraries and software.

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

bfclust

Boundary Forest Clustering

bfclust-python

Boundary Forest Clustering - python implementation

bfclust_scripts_data

boundaryforest

Boundary Forest in MATLAB

chromeextensions

circosjs

d3 library to build circular graphs

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

data-structures

datastructures

for python

diceroller

dice roller app

dna_ft

Fourier Transform of a DNA sequence

dna_stft

STFT of a DNA sequence

dsurujon.github.io

epnd

Exon Prediction via Nucleotide Distributions

fastani

Fast Whole-Genome Similarity (ANI) Estimation

fastx_toolkit

FASTA/FASTQ pre-processing programs

fitnessprediction

galaxy_tools

Wrappers for galaxy tools

genbank-scripts

genome-assembly

genome assembly for strep pneumo main scripts

go

The Open Source Data Science Masters

hostentropy

Analysis of host transcriptome entropy during an infection to predict disease outcome

ising

july

A small library for creating pretty heatmaps of daily data.

knitr

A general-purpose tool for dynamic report generation in R

makecachematrix

R programming assignment 2

metatranscriptomics_pilot

A Pilot Project for Read Counts, Novel Transcripts and Population Level Functions in Metatranscriptomes