Comments (2)
All these *_giotto()
were removed at some point, but it seems like one of our merges brought them back. They are all replaced with *_flex()
functions that can be found in the utilities.R file. I've updated auxiliary.R and will also start doing that for all other files.
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Perfect, thanks!
from giotto.
Related Issues (20)
- I did not find the slice@minmax parameter, slice@minmax parameter, slice@boundaries parameter, etc. Where should I find them? HOT 1
- Error in stats::kmeans(x, centers = 2, nstart = nstart, iter.max = iter.max)
- Giotto installation Error: object 'get_dimReduction' is not exported HOT 2
- Error in createGiottoVisiumObject HOT 1
- Applying ext and spatShift tranformations on gobj HOT 2
- An empty giottoPoints object can corrupt the giotto obj HOT 4
- Error in DWLS deconvolution result with Pie plots HOT 2
- spatCellCellcom does not allow verbose='none' if do_parallel=TRUE
- spat/exprCellCellcom can return Inf/Inf- values that error plotCCcomDotplot HOT 1
- binSpect function error on large datasets
- error in installing Giotto HOT 2
- createGiottoCosMxObject: Error in cat HOT 2
- Creating Polygons with Interactive Selection Tool HOT 7
- Stereo-seq tutorial: Error in Giotto::anndataToGiotto(anndata_file) : object 'sc' not found HOT 9
- About spatial proximity test
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- seuratToGiottoV5 HOT 2
- .h5Seurat fileError in function readPNG(image_path): Unable to open file at path D/giotto/photo/image_rz1.png.
- Error when using giottoToSeuratV5 (CosMX data) HOT 1
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