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dracogenius17's Projects

boxtree icon boxtree

Quad/octree building for FMMs in Python and OpenCL

c302 icon c302

c302 is in the process of moving here from https://github.com/openworm/CElegansNeuroML/tree/master/CElegans/pythonScripts/c302

catmaid icon catmaid

Collaborative Annotation Toolkit for Massive Amounts of Image Data

celegansneuroml icon celegansneuroml

NeuroML based C elegans model, contained in a neuroConstruct project, as well as c302

informationmeasures.jl icon informationmeasures.jl

Entropy, mutual information and higher order measures from information theory, with various estimators and discretisation methods.

network icon network

To develop a model for predicting how structural changes to a neural network affects its dynamic behavior.

neuronal-analysis icon neuronal-analysis

Tools to produce, analyse and compare both simulated and recorded neuronal datasets

open-worm-analysis-toolbox icon open-worm-analysis-toolbox

A testing pipeline that allows us to run a behavioural phenotyping of our virtual worm running the same test statistics the Schafer Lab used on their worm data.

openworm icon openworm

Project Home repo for OpenWorm Wiki and Project-wide issues

pymc3 icon pymc3

Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano

pyopenworm icon pyopenworm

Unified, simple data access python library for data & facts about C. elegans anatomy

seq icon seq

working with biological sequence data

simple-c-elegans icon simple-c-elegans

Minimalist Python code -- based on OpenWorm and the published literature -- for modeling C. elegans neural network dynamics

simplewebeditor icon simplewebeditor

A light-weight single .HTM file for scribbling HTML, CSS & JS and generate dynamic output.

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